Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2057 ATGGCTGCAGAGTTTATAACATTTTCTTTCTTGAAAATGTCGTTTGGCAAGAAACTGCTCCTCCATATTCTGTGGTGTTTCTCCTTGATCGGTCTCAGTTCCCAAACACGGAAACATTACAGTTTTGTTGTGAGAGAAGCCCAATATACAAGACTCTGTTCCACAAAAAACATATTAACTGTGAATGGATATTCTCCAGGACCAACTATCAGAGTCCACAGGGGAGACACAATCTTTGTTAATGTTTATAACAGGGGCAAACACAATATCACTTTACACTGGCATGGAGTGAAGCAACCAAGGAATCCATGGACAGATGGTCCTGCATACATAACTCAATGCCCCATCCAACCTGGAAGGAAATTTAGACAGAAGTTGATTTTTTCTACTGAGGAAGGGACCATATGGTGGCATGCTCATAGTGACTGGGCAAGAGCCACTATTCATGGGGCTATCTATGTCTATCCACAAAAGAATAGTACCTACCCTTTTCCCAAGCCTGATGCAGAGATTCCTATCATATTTGGAGAATGGTGGAAGAGTGATGTCAATGAGGTCTTCATAGAATCTATTCAAACTGGAGGAGCCCCTAACATATCTGATGCTCTCACTATAAATGGTCAACCCGGGGATCTGTACCCTTGCTCAGCATCAGAAACATTCAAGTTAAATGTAGACCAAGGCAAGACTTATCTCCTCCGCGTTGTCAACGCGGCAATGAATCTCATTCTCTTTTTCTCTGTCTCCCAACACAACCTCACTGTTGTTGGTGCTGATGCAATGTACACGAAGCCATTGACAAGAGAATACATATGCATATCACCGGGGCAAACAATGGATGTATTATTGCATGCCAACCAAGAACCTAGTCATTATTATCTGGCTGCAAGGGCATATTCGAGTGGGGCTGGAGTTGCCTTTGCTAACACCACAACCACTGCAAGAGTAGAGTATAATGGGAATTACACTCCACCTTCACCTCCTTCATTACCATACCTTCCAAACTTTAATGACACAAAAGCCGCTTTTGACTTCATTTCAAGCATGAGAGGCTTACCTCAAAGTTACCCCCACTCAGTCCCAACAAATATCACAACTCAAATAGTTACCACTCTTTCTGTCAACACGTTCCCATGCCCCAATGGAAGAACCTGCCAAGGACCAAATGGAACCATTTTTGCTGCTAGCATGAACAACATTAGTTTTGAGACGCCTAACTTTGACATTCTAGAAGCCTATTACTACCATATCAATGGGGTATTCAAAACAGGATTTCCTAGATTTCCACCATATATATTTAACTTCACTGCGGATTTTTTGCCTCTAACCTTGAATATTCCAAGGCAAGGGACAAAGGTTAATTTTCTGAACTATGGTTCAACGGTGGAAATAGTTTTCCAAGGGACAAACGTTGTTGGGGGGATAGACCATCCTATGCATCTGCATGGATTCAGTTTCCATGTTGTTGGATTTGGGTTTGGCAATTTCAACGAAAGCAAAGACCCCATGAATTTCAATCTCATTGATCCTCCTTATTTGAATACAGTGATTGTGCCAATAAATGGATGGGCTGCAATAAGGTTCGTGGCTACCAACCCTGGAGTATGGTTTATGCATTGCCATCTAGAACGCCACCAATCTTGGGGCATGGAGACAGTGTTTATTGTGAAGAATGGCAAGTCTTCCAATGAAACATTACCTCCTCCACCGCCAGACATGCCACCATGTTGA 1731 0.4252 MAAEFITFSFLKMSFGKKLLLHILWCFSLIGLSSQTRKHYSFVVREAQYTRLCSTKNILTVNGYSPGPTIRVHRGDTIFVNVYNRGKHNITLHWHGVKQPRNPWTDGPAYITQCPIQPGRKFRQKLIFSTEEGTIWWHAHSDWARATIHGAIYVYPQKNSTYPFPKPDAEIPIIFGEWWKSDVNEVFIESIQTGGAPNISDALTINGQPGDLYPCSASETFKLNVDQGKTYLLRVVNAAMNLILFFSVSQHNLTVVGADAMYTKPLTREYICISPGQTMDVLLHANQEPSHYYLAARAYSSGAGVAFANTTTTARVEYNGNYTPPSPPSLPYLPNFNDTKAAFDFISSMRGLPQSYPHSVPTNITTQIVTTLSVNTFPCPNGRTCQGPNGTIFAASMNNISFETPNFDILEAYYYHINGVFKTGFPRFPPYIFNFTADFLPLTLNIPRQGTKVNFLNYGSTVEIVFQGTNVVGGIDHPMHLHGFSFHVVGFGFGNFNESKDPMNFNLIDPPYLNTVIVPINGWAAIRFVATNPGVWFMHCHLERHQSWGMETVFIVKNGKSSNETLPPPPPDMPPC* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2057 576 CDD CuRO_1_LCC_plant 40 156 IPR034288 GO:0005507
Apr8g2057 576 Pfam Multicopper oxidase 171 321 IPR001117 -
Apr8g2057 576 ProSitePatterns Multicopper oxidases signature 2. 539 550 IPR002355 GO:0005507
Apr8g2057 576 SUPERFAMILY Cupredoxins 358 576 IPR008972 -
Apr8g2057 576 SUPERFAMILY Cupredoxins 164 350 IPR008972 -
Apr8g2057 576 TIGRFAM laccase: laccase 38 576 IPR017761 GO:0046274|GO:0048046|GO:0052716
Apr8g2057 576 Pfam Multicopper oxidase 44 158 IPR011707 GO:0005507
Apr8g2057 576 Gene3D - 166 353 IPR008972 -
Apr8g2057 576 Gene3D - 382 576 IPR008972 -
Apr8g2057 576 ProSitePatterns Multicopper oxidases signature 1. 534 554 IPR033138 -
Apr8g2057 576 Gene3D - 30 156 IPR008972 -
Apr8g2057 576 Pfam Multicopper oxidase 447 559 IPR011706 GO:0005507|GO:0016491
Apr8g2057 576 SUPERFAMILY Cupredoxins 36 180 IPR008972 -
Apr8g2057 576 CDD CuRO_3_LCC_plant 420 559 IPR034289 GO:0005507
Apr8g2057 576 PANTHER MULTI-COPPER OXIDASE 43 576 IPR045087 -
Apr8g2057 576 PANTHER LACCASE-15 43 576 - -
Apr8g2057 576 CDD CuRO_2_LCC_plant 171 318 IPR034285 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2057 Apr-Chr8 31201165 31206372 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2057 K05909 K19791 gmx:100817468 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1430 6 23087111 23089650 Apr8g2057 8 31201165 31206372 PCT