Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1644 ATGAAGCTGCAAATACAACAGCAAAACCTGTTCTTGGTGCCATTTTTCTTGCTCTTTATTGCTGCTTTTCCTTCAAAAGCAAATGGGTCTCTGCTACCATTTATAGATCCTCCCAGCAGTCTATTGGCTGATCTATGGTCTGATCGCTTGCCAGACCCATTTCGTGTGCTAGAACAGATTCCAATTGGGGTTGGCAAAGATGAACCATCCATGGCTCTATCACCCACAAGAGTGGACTGGAAGGAGACACCAGAGGGGCATGTGATAATGCTGGACGTGCCAGGGTTGAAGAGAGATGAGATAAAGATAGAGGTGGAAGAGAATAGGGTGTTGAGAGTAAGTGGTGAGAGAAAGAAGGAGGAAGAGAAGAAAGGTGATCACTGGCACAGGGTGGAGAGGTCCTATGGCAAGTTTTGGAGACAATTTAGGTTGCCGGAAAATGTTGACTTGGATTCTGTGAAGGCTAAGTTGGAAAATGGGGTGCTTACTTTGACACTTGAAAAGCTGTCACCTGATAAGATCAAAGGTCCCAGGGTGGTGAGCATTGCTGGGGAGAATGAGGAACCAGCCAAGCTAACCAATGATGGGGCCAAGCAAGAGCTTTGA 606 0.4653 MKLQIQQQNLFLVPFFLLFIAAFPSKANGSLLPFIDPPSSLLADLWSDRLPDPFRVLEQIPIGVGKDEPSMALSPTRVDWKETPEGHVIMLDVPGLKRDEIKIEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPENVDLDSVKAKLENGVLTLTLEKLSPDKIKGPRVVSIAGENEEPAKLTNDGAKQEL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1644 201 ProSiteProfiles CS domain profile. 73 180 IPR007052 -
Apr8g1644 201 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 67 185 IPR002068 -
Apr8g1644 201 MobiDBLite consensus disorder prediction 180 201 - -
Apr8g1644 201 CDD ACD_ScHsp26_like 77 168 - -
Apr8g1644 201 SUPERFAMILY HSP20-like chaperones 70 179 IPR008978 -
Apr8g1644 201 Pfam Hsp20/alpha crystallin family 79 182 IPR002068 -
Apr8g1644 201 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 17 191 - -
Apr8g1644 201 Coils Coil 103 123 - -
Apr8g1644 201 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 17 191 - -
Apr8g1644 201 Gene3D - 36 184 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1644 Apr-Chr8 26601932 26602887 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1644 K13993 - gmx:100500319 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1644 8 26601932 26602887 Apr8g1644 8 26601932 26602887 ECH