Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1333 ATGTCTCTAGTCACAGCTGAGATCAAAGCCAAATCAGAGGTGTACCATGGAGATGAACTCTGCCAAGAAAAGACCAAGTTTTTGCTGAAGGAAGTAGGGCTACCCAATGGCCTTTTGCCCTTGAAAGACATAGAAGAATGTGGGTATGAAAAGGAAAGTGGGTTCGTGTGGCTTAAGCAGAAAAAGGCCATAAACCACAAGTTTGAGAAGATTGGGAAGTTAGTGTCTTATGCTCCTGAAATCACTGCCTATGTTGAGGTTGGTAAGATAAAGAAGCTCACTGGTGTGAAGGCCAAGGAGATATTGGTTTGGATCACACTGAATGAGATCTTTGTTGATGATCCACCAACTGGCAAAATCACGTTCAAAAACCCTTCAGGGCTTTTCAGGACATTCCCAGTCTCAGCTTTTGAGATTGAGGAGCCAGTTAAGGATGTCAAGGAAGAAAACAAGCAAGTCACACCAGTCCCCAGTGTTGTTGCGGTCAGAGAGGTTTGA 498 0.4418 MSLVTAEIKAKSEVYHGDELCQEKTKFLLKEVGLPNGLLPLKDIEECGYEKESGFVWLKQKKAINHKFEKIGKLVSYAPEITAYVEVGKIKKLTGVKAKEILVWITLNEIFVDDPPTGKITFKNPSGLFRTFPVSAFEIEEPVKDVKEENKQVTPVPSVVAVREV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1333 165 SUPERFAMILY At5g01610-like 3 143 IPR036758 -
Apr8g1333 165 Pfam Protein of unknown function, DUF538 28 138 IPR007493 -
Apr8g1333 165 PANTHER T31J12.3 PROTEIN-RELATED 2 155 IPR007493 -
Apr8g1333 165 PANTHER PLANT/F25P12-18 PROTEIN 2 155 - -
Apr8g1333 165 Gene3D - 5 148 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1333 Apr-Chr8 20010004 20012279 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1333 - - gmx:100500427 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1333 8 20010004 20012279 Apr8g1333 8 20010004 20012279 ECH
Apr4g0655 4 5400322 5401219 Apr8g1333 8 20010004 20012279 PCT