Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1330 ATGAACACAATTGCCCTTATTCGCAACCGCGCAATGAAACCCGCTCGTAGGATTCTCACTTCTTCAATCAATTCATCGTTTTTGGGATTGAAACCTCGTTTCAATCACCACCACACCAATCCGATTCATTGCATACAGCGTAGTCCTCACAAAGTTTTCCTCTTACCCTTTTTGAATTCTAGCGCAACCAACAGGGATGTCTCCACCTTTGCCTTCAAGGTTCAAAATTTCTCAACTACCGTCGAGACCCGTGTCAGTGACAATAATTTTGAGAGGATTTACATACAGGGTGGCATTAATTTGAAGCCTTTGGTGGGGGAAAGTGTTCATAAGGGTGATGAGAATGTTGTTGGAAATGAAGATGTTAGCACAAGCACAGAGAATGTGACTCTGGGGAAGACTAAAGGGGTAGACACAGATGTGGAAAAAGAAGCATGGAAATTGTTGCAGGGTGCTGTGGTTACTTATTGTGGTAACCCTGTGGGGACAGTGGCTGCAAATGATCCTGGTGACAAGTTACCTTTGAATTATGATCAGGTCTTTATTAGGGATTTTGTCCCTTCAGCTCTTGCTTTCTTGCTCAGAGGAGAAAGTGAGATTGTCAAGAATTTTCTTCTTCACACCTTGCAGTTGCAGAGTTGGGAGAAAACAGTGGACTGTTACAGTCCAGGTCAGGGCTTGATGCCTGCAAGTTTCAAAGTTAGAACTGTGGCTCTTGATGGAGATAATCATGAAGAAGTTTTAGATCCAGATTTTGGGGAATCTGCTATTGGTCGTGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTGTTGCGGGCTTATGGGAAGCTCACTGGTGACTACAGCTTGCAAGAAAGGGTGGATGTTCAAACAGGCTTAAAAATGATCCTTAAATTGTGTTTAACTGATGGTTTTGATATGTTTCCTTCTCTGCTAGTCACCGATGGGTCTTGCATGATAGACAGGCGGATGGGCATTCATGGTCACCCCCTTGAGATCCAAGCATTGTTTTACTCAGCTCTTCGTTGCTCACGTGAGATGCTTGCAGTAAGTGATGGAACCAATAATCTGATTAGAGCCATTAACAACAGACTCAGTGCACTGTCATTCCATATTAGAGAATACTACTGGGTGGATATGAAAAAGATGAATGAAATATACAGGTATAAAACAGAAGAGTACTCCATGGATGCCATCAACAAATTCAACATCTATCCAGAACAAATTCCTTTGTGGCTAATGGATTGGATTCCAGAAGAAGGTGGGTATCTGATTGGAAATCTGCAGCCAGCTCACATGGATTTCAGGTTTTTCACTCTTGGAAATCTTTGGTCTATTGTTTCATCGTTGGGCACCCCAAGACAGAACCAGGCTATCTTAAATCTGATGGAAGCAAAATGGGATGATCTCGTGGGTCATATGCCTCTTAAGATATGTTATCCTGCATTAGATAATGAGGAATGGCGCATAATTACTGGCAGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACCCTTCTGTGGCAGTTCACTCTGGCATGCATCAAAATGGGGAGAATTGAACTTGCCCAGAAAGCAGTTACTTTGGCAGAGAATCGACTACCAGTTGATTCTTGGCCTGAATACTACGACACACGTAATGGAAAATTCATTGGAAAACAAGCCCGGATGCATCAAACATGGACTATAGCTGGGTTCCTTACATCCAAGATGCTTTTGAAGAATCCTGAAATGGCATCAATGTTATTCTGGGAGGAGGATTATGAGCTTCTTGAGATATGTGTATGTGGACTTGGCAAAAGTGGCAGGAGAAAGTGTTCCCGTATTGCTGCCAGGTCTCAGATTCTTGTGTGA 1878 0.4308 MNTIALIRNRAMKPARRILTSSINSSFLGLKPRFNHHHTNPIHCIQRSPHKVFLLPFLNSSATNRDVSTFAFKVQNFSTTVETRVSDNNFERIYIQGGINLKPLVGESVHKGDENVVGNEDVSTSTENVTLGKTKGVDTDVEKEAWKLLQGAVVTYCGNPVGTVAANDPGDKLPLNYDQVFIRDFVPSALAFLLRGESEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALDGDNHEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYSLQERVDVQTGLKMILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLAVSDGTNNLIRAINNRLSALSFHIREYYWVDMKKMNEIYRYKTEEYSMDAINKFNIYPEQIPLWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPRQNQAILNLMEAKWDDLVGHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAVTLAENRLPVDSWPEYYDTRNGKFIGKQARMHQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLEICVCGLGKSGRRKCSRIAARSQILV* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1330 625 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 22 625 - -
Apr8g1330 625 Gene3D - 176 571 IPR012341 GO:0005975
Apr8g1330 625 SUPERFAMILY Six-hairpin glycosidases 145 576 IPR008928 GO:0005975
Apr8g1330 625 Pfam Alkaline and neutral invertase 145 584 IPR024746 GO:0033926
Apr8g1330 625 PANTHER - 22 625 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1330 Apr-Chr8 19984095 19987742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1330 - - gmx:100785091 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1330 8 19984095 19987742 Apr8g1330 8 19984095 19987742 ECH
Apr4g0653 4 5392192 5395024 Apr8g1330 8 19984095 19987742 PCT