Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1052 ATGTCAAGGGGTAGATCTGATGGATCACAAAAGAAGCGTTTAGTTGCTTCCGTTTGTGGTGTGGCAATCTTTCTTGGTTTTCTATACGTGTACCAAGGATCTATCTTTGGTTCTCAAAATAGTGGTTCATCTGCACTTGAATATGGCAGCAAGTCATTGAAAAGACTTGGGGCATCATATTTGGGAGCAGATGATGATGCTGATGGCAAGCAAGATGAATCTTCATCAATCTTAGGGCAGGGAGATGGGGAGGATGATATCGTACCTAAGAGTTTCCCTGTTTGTGATGATCGTCATTCAGAGTTGATTCCCTGCTTAGACAGGCACCTCATCTATCAAATGAGACTGAAGCTGGATCTTTCTTTGATGGAACACTACGAGAGACATTGTCCTCCTGCAGAAAGGAGGTACAATTGTTTGATTCCTCCTCCACCTGGATACAAGGTCCCTATTAAGTGGCCACAGAGCAGAGATGAGGTGTGGAAAGCAAATATACCACATACTCACCTTGCACATGAGAAGTCTGATCAGAACTGGATGATTGTAAAAGGTGACAAGATAGTGTTTCCTGGAGGAGGGACACATTTTCACCATGGAGCTGATAAGTACATAGCTTCAATTGCAAATATGCTCAACTTTTCAGGCAATAATCTTAACAACGAAGGAAGATTGCGGACAGTGCTTGATGTTGGCTGTGGTGTTGCGAGTTTTGGAGCTTATCTTCTATCATCTGATATCATTGCAATGTCCTTGGCACCCAATGATGTCCATCAAAATCAAATTCAATTTGCTCTAGAAAGAGGAATTCCTGCATATCTTGGTGTCTTGGGGACTAAGAGACTCCCTTATCCAAGCAGATCATTTGAACTTGCACACTGTTCTCGTTGTAGGATTGATTGGCTGCAAAGGGAGGGAATACTACTCCTTGAGCTAGACCGGTTGCTTAGACCAGGAGGTTATTTTGCATACTCCTCTCCTGAAGCATATGCTCATGATGAAGAGGATCTAAGGATATGGAGAGAAATGAGTGCCCTTGTTGGACGTATGTGTTGGAAAATTGCTGCAAAGAGGGACCAAACTGTCATCTGGCAAAAACCTCTCACAAATGATTGCTATATGGAAAGAGAACCTGGCACTCGCCCTCCTCTTTGCCAGTCTGATGATGACCCAGATGTCGTTTGGGGAGTGAATATGGAAGCTTGCATAACACCTTACTCTGACCATGATAACAGAGCCAAGGGTAGTGGATTAGCTCCATGGCCTTCAAGATTGACCAGTCCTCCTCCTAGATTAGCTGACTTTGGCTACTCAAATGAAATGTTTGAAAAGGATACGGAACTATGGCAAGGAAGAGTTGATAATTACTGGAATCTGTTGAGTCCAAAAGTCACGTCAAACACACTGAGGAATGTGATGGATATGAAAGCAAACATGGGTTCATTTGCAGCTGCTCTTAGAGGCAAGGATGTTTGGGTGATGAATATTGTACCTCGTGATGGACCAAACACACTTAAGGTTGTATATGACAGAGGCCTCATCGGGACTACTCATGACTGGTGTGAAGCATTTTCAACATACCCCAGGACTTATGACATGCTCCATGCATGGACTGTCTTTTCTGACCTTGAAAAGAGAGAGTGTAGTCCAGAGGATCTATTGATTGAGATGGACCGTATGCTTAGGCCTACTGGTTTAATTGTCATAAGGGATAAACAACATGTGATTGATTTTATCAAGAAGTACCTAACAGCATTGCACTGGGAAGTAGTTGCAACTTCAGATGCAAGTTCTGACTCTGACCAAGATGGCAATGAAGTTGTTTTTGTCATCCAAAAGAAATTGTGA 1845 0.4293 MSRGRSDGSQKKRLVASVCGVAIFLGFLYVYQGSIFGSQNSGSSALEYGSKSLKRLGASYLGADDDADGKQDESSSILGQGDGEDDIVPKSFPVCDDRHSELIPCLDRHLIYQMRLKLDLSLMEHYERHCPPAERRYNCLIPPPPGYKVPIKWPQSRDEVWKANIPHTHLAHEKSDQNWMIVKGDKIVFPGGGTHFHHGADKYIASIANMLNFSGNNLNNEGRLRTVLDVGCGVASFGAYLLSSDIIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQREGILLLELDRLLRPGGYFAYSSPEAYAHDEEDLRIWREMSALVGRMCWKIAAKRDQTVIWQKPLTNDCYMEREPGTRPPLCQSDDDPDVVWGVNMEACITPYSDHDNRAKGSGLAPWPSRLTSPPPRLADFGYSNEMFEKDTELWQGRVDNYWNLLSPKVTSNTLRNVMDMKANMGSFAAALRGKDVWVMNIVPRDGPNTLKVVYDRGLIGTTHDWCEAFSTYPRTYDMLHAWTVFSDLEKRECSPEDLLIEMDRMLRPTGLIVIRDKQHVIDFIKKYLTALHWEVVATSDASSDSDQDGNEVVFVIQKKL* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1052 614 MobiDBLite consensus disorder prediction 64 85 - -
Apr8g1052 614 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 614 - -
Apr8g1052 614 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 357 IPR029063 -
Apr8g1052 614 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 612 IPR004159 GO:0008168
Apr8g1052 614 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 614 IPR004159 GO:0008168
Apr8g1052 614 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 436 584 IPR029063 -
Apr8g1052 614 Gene3D Vaccinia Virus protein VP39 217 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1052 Apr-Chr8 13592805 13598667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1052 - - gmx:100806600 1173.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0038 4 378094 382368 Apr8g1052 8 13592805 13598667 PCT