Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0713 ATGGAGAAAGCAAATTCGTCATCCGGATTAGTGAGGACAAAATCGGATCAGCTAGTGGAGTCAATGGTGGCAGCTTTGAAATCACCACCGTCTGATCATTCAATGAACGGAATGATGGAAGGTGGTGGGACCCTTTCGAGGAAATCAAGCCGGCGGCTGACGGCGGCGTCGCCGGGACGCGGCGGCGGAAAGAACACACACATAAGAAAGTCAAGGAGTGCTCAAATAAGTCAAATGAAATTGGAGCTTGATGATGTGAGTAGTGGTGCAGCACTTAGTAGAGCCTCGAGTGCTAGCTTGGGACTCTCATTTTCATTCACTGGATTCACTATGCCTCCTGAGGATATTGCTGACTTCAAACCTTTCAGTGATGATGATATCCCGGAGGATATCGAAGCTGGAAGAAAGACAAAGTTTCAAACGGAGCCTACTTTGCCTATATATCTTAAGTTCACGGATGTGACATACAAGATAGTGATCAAAGGCATGACAACAACTGAAGAGAAGGATATCTTGAATGGGATCACTGGTTCTGTAAATCCAGGTGAAGTTTTGGCATTGATGGGTCCCTCGGGAAGTGGAAAGACAACTCTATTAAATTTGCTTGGAGGCAGGTTAAGTCAGCCCATGGTTGGTGGTTCTATCAGTTACAATGACCAACCATATTCCAAGTTCCTCAAGAGCAAGATAGGATTTGTGACACAAGATGATGTTCTATTTCCTCACCTAACTGTGAAAGAAACATTAACATACGCAGCCAGGCTAAGACTTCCAAAGACATTCACAAAGGAGCAGAAAGAAAAACGAGCTTTAGATGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTTCGTGGAGTATCTGGTGGAGAGAGGAAGAGGGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTAAGGATCGTTCAGATGCTGCAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACAACAATCCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGTTTGCTTTACTTTGGAAAAGCACCAGAAGCAATGAATTACTTCCATTCTATAGGGTGTTCACCACTTATTTCCATGAACCCAGCAGAGTTCTTGCTAGACCTTGCTAATGGAAACATTAATGATGTTTCCCTACCTTCAGAGTTGGAAGATAGAGTGCAAATGGGAAATGCAGAAGCTGAAACACACAGTGGAAAACCATCACCAGCAGTTGTACATGAGTATCTGGTGGAGGCATATGAAACTAGAGTAGCAGAAACAGAAAAGAAAAAAATAATGGTTCCTATCCCCCTTGATGAAGCAGTGAAGTCTAAAGTAAGTTCTCCTAAAAGACAATGGGGAGCTAGTTGGTGTGAACAATATTCCATACTATTTTGGAGAGGAATCAAAGAAAGGAGGCATGACTACTTTAGCTGGCTGAGAATCACCCAAGTTTTATCCACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATGCTAAGAACCCAAAAGATCTACAAGATCAGGCAGGACTACTTTTCTTTATTGCTGTTTTCTGGGGATTTTTTCCTGTTTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCAATGCTGAGTAAGGAACGAGCAGCAGATATGTACAGACTAAGTGCATACTTCTTGGCTAGAACCACAAGTGACCTTCCACTAGACCTCATATTACCAGTGCTCTTTCTACTTGTTGTTTACTTCATGGCTGGTCTCAGACTCAGTGCTGCCCCTTTTTTCTTCACCATTCTCACTGTTTTCCTCTGCATTGTGGCAGCTCAGGGACTGGGACTCGCTATTGGGGCTACACTAATGGACTTAAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTCGCTGGAGGATTTTTTGTGCAGAAAGTGCCTGTGTTTTTTTCTTGGATCCGCTACATGTCTTTCAACTACCACACCTACAAACTATTGCTAAAGGTGCAATATGAACACTTGGCACCTACCATTAATGGGATCAAAATTGATAATGGTGTAACAGAGGTATCTGCTCTAATTGCCATGGTTTTTGGTTACCGTTTCTTGGCATATCTTTCTTTGAGACGAATGAAACTTCAATCTGGAGCTTGA 2238 0.4285 MEKANSSSGLVRTKSDQLVESMVAALKSPPSDHSMNGMMEGGGTLSRKSSRRLTAASPGRGGGKNTHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEDIADFKPFSDDDIPEDIEAGRKTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSQPMVGGSISYNDQPYSKFLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPKTFTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKAPEAMNYFHSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDRVQMGNAEAETHSGKPSPAVVHEYLVEAYETRVAETEKKKIMVPIPLDEAVKSKVSSPKRQWGASWCEQYSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSAAPFFFTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPVFFSWIRYMSFNYHTYKLLLKVQYEHLAPTINGIKIDNGVTEVSALIAMVFGYRFLAYLSLRRMKLQSGA* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0713 745 Pfam ABC transporter 172 323 IPR003439 GO:0005524
Apr8g0713 745 MobiDBLite consensus disorder prediction 26 74 - -
Apr8g0713 745 Pfam ABC-2 type transporter 352 413 IPR043926 GO:0140359
Apr8g0713 745 Gene3D - 148 389 IPR027417 -
Apr8g0713 745 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 739 - -
Apr8g0713 745 ProSitePatterns ABC transporters family signature. 295 309 IPR017871 GO:0005524
Apr8g0713 745 SMART AAA_5 181 372 IPR003593 -
Apr8g0713 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 387 IPR027417 -
Apr8g0713 745 CDD ABCG_EPDR 146 377 - -
Apr8g0713 745 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 149 395 IPR003439 GO:0005524
Apr8g0713 745 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 13 739 - -
Apr8g0713 745 Pfam ABC-2 type transporter 490 699 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0713 Apr-Chr8 6849522 6859356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0713 171 409 Calmodulin-binding Proteins AT2G36910 29.388 2.77e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0713 K05681 - gmx:100798801 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0713 8 6849522 6859356 Apr8g0713 8 6849522 6859356 ECH
Apr4g0408 4 3469264 3477944 Apr8g0713 8 6849522 6859356 PCT