Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0580 ATGCTAGTGTCTGATGATGACTATTTCTTGATGGAACTCGCATTGGATGAGATACTTGATAACTTTGAATCTCTAGCACGGTCTGTGGCAAGGTTGGGTAAGAAGTGCAAGGATCCAGTGTATCATGGTTATGAACATTTTGTTGACAACCCAACTCAAAATTATCTCAAATGGTCTGGGTGGGAATATGCATGGAAAAAGATGGAGAGGAAGGTGAAGAAAATGGAAAGATTTGTTGCTGCTATGTCACTGTTGTCTCAAGAAATTGAGGTACTAGCAGAGAGAGAACAAACTTTCAGTACAACGAAGGAGAATCCCAAGTTTCATAGGGTGAAATTGCTCGAGTTTCACAGCAAGGTCGCGTGGCAGCGCCAGCAAGTGAAAACTCTAAGGGACATGACTCCATGGAACAGAAGTTATGACTATATTGTCCGGTTATTGGCAAGATCATTGTTCACAATTTTGGAGAGAATCATTCTTGTCTTTGGAAATAGTCATCTACCAATTGAAAAGAAACAAGATGATTCTCCCCCTTTAAGTAAAACTAAGAATCATCTCACACGCACGCGTTCCTTTTCTGCTCCAATGCATTCTTCAATTCATCCTTCTGAGCTAGTTGACAAGAAAAAGAGCAAGAGAAAGAACAAAGAGCAGCAAGTGCTTCTTCATTCAGAAAGCAAGCAGTTCAAACACTTTGGACCATTCAAAGGATGTATGTCTGTTGGAAATGACTCTCCTATCTGTATGCCAACTAATGGTGGTTCTATGAGGTTGGTTGATTGTCATGTGAAGAACATTGATAACATGAAAACAGTGGATAAATTAAAATTTTCTCCCGTTCACAGAAGTAGAATTTATTTTAAACTATCTATGAAGGGTCGGTTAAAGCCAGCTTTATCTACACTTGGTGATGCAGCTTTCGCTCTCCATTATGCTAATGTGATTGTACTAATAGAGAAGATAGTTTCAGGAACTCACCACATTGATCTTGAAACAAGGCACAATCTTTACAATATGTTACCAACCACTATAAGAACCTCTCTGAGGGGTAAGCTCAAGTGGTATGCTAAGAGCAAACATTCCATGATTCATGCAGCTAGCCTTGCAGTGGAATGGAGTATGGTACTCACCCAAATATTGGAATGGTTGGCACCACTGGCACACAACATGATAAGGTGGCATTCTGAGAGGAGTTTTGAGAAGGAGCACACTGCTTTGAAAGCTAGTGTTTTGCTTGTCCAGACTCTTTACTTTGCGAACCAAGCAAAAACAGAAGCTGCAATGGTTGAACTCCTTGTTGGTCTACACTATGTGTGCAAGATTGATAGAGAAGCTCACATTAGAGATGCAGGGTCTAGATCTTTCAATGGTGTTCATTTGCGAAAGAATGAGCTGTTGCAATAA 1404 0.4024 MLVSDDDYFLMELALDEILDNFESLARSVARLGKKCKDPVYHGYEHFVDNPTQNYLKWSGWEYAWKKMERKVKKMERFVAAMSLLSQEIEVLAEREQTFSTTKENPKFHRVKLLEFHSKVAWQRQQVKTLRDMTPWNRSYDYIVRLLARSLFTILERIILVFGNSHLPIEKKQDDSPPLSKTKNHLTRTRSFSAPMHSSIHPSELVDKKKSKRKNKEQQVLLHSESKQFKHFGPFKGCMSVGNDSPICMPTNGGSMRLVDCHVKNIDNMKTVDKLKFSPVHRSRIYFKLSMKGRLKPALSTLGDAAFALHYANVIVLIEKIVSGTHHIDLETRHNLYNMLPTTIRTSLRGKLKWYAKSKHSMIHAASLAVEWSMVLTQILEWLAPLAHNMIRWHSERSFEKEHTALKASVLLVQTLYFANQAKTEAAMVELLVGLHYVCKIDREAHIRDAGSRSFNGVHLRKNELLQ* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0580 467 PANTHER BNAC09G50660D PROTEIN 2 204 - -
Apr8g0580 467 PANTHER BNAC09G50660D PROTEIN 209 465 - -
Apr8g0580 467 PANTHER PLANT/T32M21-140 PROTEIN 209 465 - -
Apr8g0580 467 PANTHER PLANT/T32M21-140 PROTEIN 2 204 - -
Apr8g0580 467 MobiDBLite consensus disorder prediction 182 198 - -
Apr8g0580 467 MobiDBLite consensus disorder prediction 202 218 - -
Apr8g0580 467 Pfam Protein of unknown function (DUF668) 301 392 IPR007700 GO:0045927
Apr8g0580 467 MobiDBLite consensus disorder prediction 171 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0580 Apr-Chr8 5197621 5199024 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0580 - - aprc:113870876 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0580 8 5197621 5199024 Apr8g0580 8 5197621 5199024 ECH
Apr4g0276 4 2310297 2312965 Apr8g0580 8 5197621 5199024 PCT