Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0550 ATGACTTCCCAAACACAAAACCTCAACTTTGTGTTGTTTCCTTTGATGTCTCAGGGCCACATGATTCCCATGATGGACATTGCAAGAGTGTTGGCACAGCAAGGTGTTACTGTCAGTGTAATCACCACACCCCACAATGCAGCACGTTTCTCGTCAACTTTTGCTCGTTCCATTGATTCAGGTTCTCAAATCAAACTAGTTGAACTCCAATTCCCATACAAAGAAGCTGGATTACCAGATGGGTGTGAGAATCTTGACATGCTACCTTCACTAGGCACTTCCTTGAGTTTCTTCAATGCAGCTAACACCCTACAGAAACCAGTAGAAAAGATCTTTGAAGAGTTAACCCCTCCACCAAGCTGCATAATTTCTGACATGTGTTTGCCTTACACAGCCAACATTGCTACAAAATTCAACATCCCTAGGATTTCTTTTCTTGGACAAAGTTGTTTTAGTCTCTTGTGTCTTTACAACTTGGGCGTCCACAAAGTTCTGTCTAGCATAGCCACAGAAACTGAGTACTTTGTGTTGCCTGGTTTGCCTGACAGAATTGAGATGACCAAAGCACAGATACCAGCACAAAAAACAACGGAAGAATGGAAAAAGTTTTATGCCAGAACTGCTGCTGCTGAAGGGGTTTCTTATGGAGTGATCATGAATTCCTTTGAAGAGTTGGAGCAAGAGTATGCAAGGGGTTACAAGAAGGCAAGGAATGGTAAAGTGTGGTGTGTTGGTCCTGTTTCACTTAGCAACAAGGATCATTTGGATAAGGCTGAGAGAGGGAACAAGGCCTCAATTGATGAACACTATTGCATGAAGTGGCTTGATTTGCAAAAACCAAGGGATGTAATATATGTTTGCCTTGGAAGCATTTGCAACATAACTCCACCGCAGTTGATAGAGCTTGGTTTGGCCTTGGAAGCATCAAATAGACCCTTCATTTGGGTTATAAGGGAAGGAAGCGAATTAGAAGCATTGGAGAAGTGGATCAAAGAAGAGGGCTTTGAGGAAAGGACTAAAGCTCAAAGCCTTGTGATTCGGGGTTGGGCTCCTCAGGTACTAATACTATCACACCCTTCAATTGGAGGCTTCTTAACACACTGTGGTTGGAACTCAACCTTAGAAGCAATATGTGCTGGTGTGCCAATGGTTACTTGGCCACTTTTTGGTGACCAATTCCTCAATGAGAAACTTATTGTACAAATATTAAGAGTAGGAGTAAGGGTTGGAGTGGAGGTTCCTGTCAAATGGGGTGAAGAAGAGAGAACGGGGGTCTTGGTGAAGAAAGAAGATGTTAAGAGAGCAATTGATGAGTTAATGAATGAGCGTAGAGAAAGTGAAGAAATGAGGAAAAGAGTTAAAGAGCTTGCAGACTTGGCCAAGAGAGCTTTAGAAGAAGGTAGATCATCTCACTCTAATGTGAAACTCCTTATCCAAGATATCATGCAACAAACCAAGAGAAATAATTGA 1470 0.4224 MTSQTQNLNFVLFPLMSQGHMIPMMDIARVLAQQGVTVSVITTPHNAARFSSTFARSIDSGSQIKLVELQFPYKEAGLPDGCENLDMLPSLGTSLSFFNAANTLQKPVEKIFEELTPPPSCIISDMCLPYTANIATKFNIPRISFLGQSCFSLLCLYNLGVHKVLSSIATETEYFVLPGLPDRIEMTKAQIPAQKTTEEWKKFYARTAAAEGVSYGVIMNSFEELEQEYARGYKKARNGKVWCVGPVSLSNKDHLDKAERGNKASIDEHYCMKWLDLQKPRDVIYVCLGSICNITPPQLIELGLALEASNRPFIWVIREGSELEALEKWIKEEGFEERTKAQSLVIRGWAPQVLILSHPSIGGFLTHCGWNSTLEAICAGVPMVTWPLFGDQFLNEKLIVQILRVGVRVGVEVPVKWGEEERTGVLVKKEDVKRAIDELMNERRESEEMRKRVKELADLAKRALEEGRSSHSNVKLLIQDIMQQTKRNN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0550 489 Gene3D Glycogen Phosphorylase B; 273 465 - -
Apr8g0550 489 CDD GT1_Gtf-like 8 470 IPR002213 GO:0008194
Apr8g0550 489 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Apr8g0550 489 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 281 400 IPR002213 GO:0008194
Apr8g0550 489 Coils Coil 481 489 - -
Apr8g0550 489 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 485 - -
Apr8g0550 489 Gene3D Glycogen Phosphorylase B; 1 272 - -
Apr8g0550 489 PANTHER GLYCOSYLTRANSFERASE 7 485 - -
Apr8g0550 489 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 483 - -
Apr8g0550 489 Coils Coil 429 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0550 Apr-Chr8 4875834 4877393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0550 8 486 Glycosyltransferase AT2G36760 58.212 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0550 K13496 K22771 gmx:100790358 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0550 8 4875834 4877393 Apr8g0550 8 4875834 4877393 ECH
Apr4g0243 4 2087063 2090181 Apr8g0550 8 4875834 4877393 PCT