Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0532 ATGGGTATACTATACGACGACGTAGTAATCATAGCGCAGCCAGACAAAGAAGGTGATCCAACAGTGATCACAGTGAATTGCCCTGACAAAACTGGTTTGGGTTGTGATTTGTGTCGTATCATACTCTTCTTTGGTCTCAACATTGTCAGAGGAGATGTTTCAACCGATGGGATATGGTGCTATATAGTTTTCTGGGTGGTTGGGAAACAGAAAACGAGGTGGAGTTTGTTGAAGAATAGGCTAGTTGAGGCATGCCCTTCTTGCTCCTCAGCTTCTGGAATCTCTTATTATGACTTGCAGCCACCACAGCCTCCTGATGTCTTTCTTTTGATGTTTTGCTGTTACGATCGGAGAGGGTTATTGCATGATGTTACAGAGGTTCTTTGTGAGCTAGAGCTTACTATAAAGAAAGTGAAGGTATCTACTACACCTGATGGCAAAGTCATGGATATGTTTTTCATCACAGATACCAGGGAAGAACTACATACAAAGAAAAGACAGAATGATACGATTGCACAATTAACAGAGGTTTTGGGTGATGCTATCATTTCTATTGACATTGAATTGGTTGGCCCGGAAATTACTGCTTGCTCCCAGACATCTCCATTCCTTCCAACTGCAATCATTGAAGATGTCTTTGATTTGGAATTGCCTGATTTGGTTCGAAGTGGTACTCTTAGATCAGATTATATTTCTATCACGATGGACAACTTGCTTAGTCCTGCTCATACCCTTGTCCAAATTATGTGCCAAGACCACAAAGGTCTTCTTTATGACATCATGAGAACTCTAAAGGACTACAACATTCAGATTTCTTATGGGCGTTTCACTACAAAACCTAGAGGAAAATGTGAGATTGATTTGTTCATCATGCAAGCAGATGGAAAAAAGATAGTTGATCCCAACAAGCAGAGTTCTTTGTCATCACGCCTTAGAATGGAACTGCTTCGTCCTCTCAGAGTCGCCGTGGTGAGTAGGGGGCCCGATACTGAGCTTCTGGTTGCAAACCCTGTGGAGTTGTCTGGCAAGGGCCGGCCTCTTGTTTTTTATGACATTACTCTTGCTCTCAAAATGCTTGGCACTTGCATCTTTTCGGCTGAAATTGGGAGACACTTAATTGGAGACCGGGAGTGGGAGGTTTATAGAGTATTGTTGGATGAAGGGGAGGGGTTATCTGTTACAAGGAACAAGATTGAGGAGGGAGTTTGGAAAATGCTGATGGGTTGGGAATAA 1233 0.4266 MGILYDDVVIIAQPDKEGDPTVITVNCPDKTGLGCDLCRIILFFGLNIVRGDVSTDGIWCYIVFWVVGKQKTRWSLLKNRLVEACPSCSSASGISYYDLQPPQPPDVFLLMFCCYDRRGLLHDVTEVLCELELTIKKVKVSTTPDGKVMDMFFITDTREELHTKKRQNDTIAQLTEVLGDAIISIDIELVGPEITACSQTSPFLPTAIIEDVFDLELPDLVRSGTLRSDYISITMDNLLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTTKPRGKCEIDLFIMQADGKKIVDPNKQSSLSSRLRMELLRPLRVAVVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGTCIFSAEIGRHLIGDREWEVYRVLLDEGEGLSVTRNKIEEGVWKMLMGWE* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0532 410 SUPERFAMILY ACT-like 242 293 IPR045865 -
Apr8g0532 410 Gene3D - 106 190 - -
Apr8g0532 410 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 410 - -
Apr8g0532 410 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 410 IPR040217 -
Apr8g0532 410 ProSiteProfiles ACT domain profile. 109 192 IPR002912 -
Apr8g0532 410 SUPERFAMILY ACT-like 18 79 IPR045865 -
Apr8g0532 410 SUPERFAMILY ACT-like 105 179 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0532 Apr-Chr8 4693752 4697337 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0532 - - gmx:100816138 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0532 8 4693752 4697337 Apr8g0532 8 4693752 4697337 ECH
Apr4g0225 4 1911301 1914583 Apr8g0532 8 4693752 4697337 PCT