Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0421 ATGAAACGCATTGATATCTTCTGTGCTTCCCAAGCTTCAACAGCTATATGTCTTAGCATGGATCAAGCATCTTGCTCCTCTTCCAATACCATTCAACTTGGAGGCCGAACCATTGACCGCCACAACCCCATCATCAATGATTCAAGAAGAAGCACTTCCAAGTCTCTCACTGCCCCATGTTCTTCTTCTCAACCACCCATCAATCCCAAGCCTTATCATGACCTCCATAAGGCAAAAAAAAACTCTTCTTTGAAGCCAAATGACCAGGACAAGAAAAGTGCAATAAAGGGCCATGATCAAAAGAAGAAAAGTACAGCAGAAAAAGTCACTGAACATGTCACCAACACTTACTCTTCTAAGCCAATTGATATCACTTTGAGGAGGAGTTGGCACAAACCACCCACTGATTCAATCACTCCTTCTGGTTCAACTAGATCTTTGCTCAGTGACAAGGCCTTATTGGATGGTTCATCAGATTATGATCCAGTTTTGGCACTCACAACAGTTAATAACAAAACTTCTCAAGTTTTTCATCGAGATGAAACCAACCCTGCTCCTAAAAACTCTAGTAGCTCTTCCAATCCAAAATCCGGTTCCCCAGACCAGGTTGTAGTACTGAGGGTTTCTTTGCATTGCAAAGGATGCGAAGGGAAGGTGAGGAAACACCTCTCCAGAATGCAAGGAGTTAGTTCATTCAACATAGATTTTGCGGCAAAGAAGGTGACAGTAATTGGGGATGTGACTCCATTGAGTGTCTTGGCAAGCATATCAAAGGTGAAAAATGCACAATTATGGCCAGCATCTGCCTCAGCAGTTGGATCTGGTATAGTTGAAACAAAGAAAAAAAGTTTATCTGATTAA 861 0.4204 MKRIDIFCASQASTAICLSMDQASCSSSNTIQLGGRTIDRHNPIINDSRRSTSKSLTAPCSSSQPPINPKPYHDLHKAKKNSSLKPNDQDKKSAIKGHDQKKKSTAEKVTEHVTNTYSSKPIDITLRRSWHKPPTDSITPSGSTRSLLSDKALLDGSSDYDPVLALTTVNNKTSQVFHRDETNPAPKNSSSSSNPKSGSPDQVVVLRVSLHCKGCEGKVRKHLSRMQGVSSFNIDFAAKKVTVIGDVTPLSVLASISKVKNAQLWPASASAVGSGIVETKKKSLSD* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0421 286 MobiDBLite consensus disorder prediction 72 109 - -
Apr8g0421 286 PANTHER OS08G0405700 PROTEIN 1 280 IPR044526 -
Apr8g0421 286 MobiDBLite consensus disorder prediction 48 63 - -
Apr8g0421 286 MobiDBLite consensus disorder prediction 28 145 - -
Apr8g0421 286 MobiDBLite consensus disorder prediction 171 200 - -
Apr8g0421 286 CDD HMA 205 258 IPR006121 GO:0046872
Apr8g0421 286 ProSiteProfiles Heavy-metal-associated domain profile. 202 259 IPR006121 GO:0046872
Apr8g0421 286 Gene3D - 199 263 - -
Apr8g0421 286 Pfam Heavy-metal-associated domain 206 258 IPR006121 GO:0046872
Apr8g0421 286 PANTHER COPPER CHAPERONE 1 280 - -
Apr8g0421 286 SUPERFAMILY HMA, heavy metal-associated domain 202 259 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0421 Apr-Chr8 3602045 3603281 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0421 - - gmx:100813295 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0134 4 1150599 1152635 Apr8g0421 8 3602045 3603281 PCT