Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0376 ATGGCCCAAGATTCCAATTCAAACCTTAGAATAATCATTGAAAGCAATCCTCCTGAGTCACGCCTAGCTGAATTGAACATCAAGTGTTGGCCCAAATGGGGTTGCTCTCCAGGGAAGTACCAGTTAAAGTTTGATGCAGAAGAGACATGCTATTTGTTGAAAGGGAAAGTGAAGGCATATACAAAAGGGTCATCAGATTTTGTAGAGTTTGGTGCTGGAGATCTTGTGACCATCCCAAAAGGACTCAATTGCACTTGGGATGTGTCTATTGCCGTTGATAAGTACTACAAATTTGAGTCAGCATCTTCTTCTATTGCTTGA 321 0.4143 MAQDSNSNLRIIIESNPPESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLNCTWDVSIAVDKYYKFESASSSIA* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0376 106 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Apr8g0376 106 PANTHER OS04G0445200 PROTEIN 6 105 - -
Apr8g0376 106 PANTHER RMLC-LIKE CUPINS SUPERFAMILY PROTEIN 6 105 - -
Apr8g0376 106 CDD cupin_TM1112-like 30 98 - -
Apr8g0376 106 Gene3D Jelly Rolls 2 98 IPR014710 -
Apr8g0376 106 SUPERFAMILY RmlC-like cupins 27 88 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0376 Apr-Chr8 3159902 3160846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0376 - - gmx:100500522 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0376 8 3159902 3160846 Apr8g0376 8 3159902 3160846 ECH
Apr4g0086 4 751202 751778 Apr8g0376 8 3159902 3160846 PCT