Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0371 ATGGGTGTCGCGGAATTTCTCCAAAAAATCTCAGCTTCGACATTGTCTTCTTCTTCCTCCTCCTCAGGATCGTCGAATATTCTTTTGAACTCGATCCTAGGATTGCCGGTGTTGGAACTTGCGACAATCTGCGTGAACCTGACTTTTGTTCTTTTGTTTATCTTTGTTGCCTCAGTGAGACGGATTCTTGTGTGTGAGGGTGGATTTCGGATTGGTAAGGATGTGAACACGGGCAATGCCAGCCCAATCTGTAGTGTTATTGATGGAGAAACGCGTGATGTTCGAATCGGTGGAGGGTTCAAGTTGTCAGTTTTGTCTTGTTTCTATGTTCTGTTTGTGCAGGTTTTGGTGTTGGGTTTTGATGGGGGTGCTTTGATTTGGGGTGAGGCTAATGGGAAGGTTGTGGATTGGTCTTTTCTTTCTGTGCCTGCTGCTCAGGGTTTAGCTTGGTTTGTGCTGAGCTTCTCGGCTTTGTATTGCAAATTCAAGGTGTCAGAAAAGTTTCCATTCTTGTTGAGAATATGGTGGTTTTTGTCGTTTATTATTTGTTTGTGTACTTTGTATGTTGATGGGAGAGAGTTTTGGGTGGAAGGTTCCAAACACCTTTGTTCTCATTCTGTTGCAAATTTTGCTATTACACCAGCTCTTGCCTTTTTGTGTGTAGTTGCAATTAGAGGTGTTACTGGAATACAAGTTTGTAGGAACTCTGATCTTCAAGAGCCATTGCTTGTTGAGGAAGAACCAGGGTGTCTCAAGGTTACTCCTTTTAGAGATGCAGGACTTTTAAGCTTGGCTACTCTCTCTTGGCTGAACCCACTTCTTTCCCTTGGTGCAAAGAGACCACTTGAGCTTAAGGACATTCCTCTTGTTGCACCAAAAGATAGAGCCAAGGCCAGTTACAAGGTTTTGAATTCTAATTGGGAGAGATTAAAGGCTGAAAATCAAAATCCCTCTAAGCAACCTTCATTAGCTTGGGCACTTCTCAAGTCATTCTGGAAGGAAGCAGCTTTGAATGCCATATTTGCTGGTGTGAATACTTTGGTGTCATATGTGGGTCCATACATGATAAGTTACTTCGTTGATTTCTTGAGTGGCAAAGAGAGTTTCCCCAATGAGGGATATATCCTTTCAGGTATATTCTTTGTTGCAAAGCTTGTGGAGACCCTGACAACTAGGCAGTGGTATCTAGGAGTAGACATATTGGGCATGCATGTTAGATCAGCTTTAACTGCAATGGTATATCGAAAGGGACTCAGACTCTCAAGCTCAGCCAGGCAAAGTCACACAAGTGGAGAGATTGTGAACTACATGGCTGTTGATGTTCAGAGAGTAGGGGACTACTCTTGGTACCTCCATGACATGTGGATGCTTCCTCTGCAGATTGTCCTTGCCCTTGTGATTTTGTACAAGAATGTTGGAATTGCTTTTGTTGCAACATTGATTGCCACAATCATTTCCATTATTGTCACTGTTCCTGTGGCTAAGATACAAGAGGATTATCAAGACAAGTTAATGGCGGCTAAAGATGAAAGAATGAGAAAGACATCAGAGTGTCTTAGGAATATGAGGATTCTCAAGCTGCAAGCTTGGGAGGATAGATATAGAATAAAGTTGGAGGAAATGCGTGGAGTAGAGTTCGGGGGTCAGCTCACTGCAGGTGGTGTTCTTTCTGCTTTAGCTACTTTCAGGATTCTACAAGAACCTCTCAGAAATTTTCCTGACTTGGTATCAACCATGGCTCAGACAAAAGTTTCTCTTGATCGCATATCTGGTTTCCTGCAGGATGAGGAATTGCAGGAGGATGCAACTATTGTCTTGCCGCGTGGCATTTCTAACATTGCCATTGAAATCACGGATGGTGTCTTCTACTGGGACTCTTCGTTGCCTAGGCCTACCCTATCAGGAATTCATATGAAGGTGGAAAAGGGGATGACTGTGGCTGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCCAAGCTTTCTGGTGAAGTAAGAGTGTGTGGCTCTGTTGCATATGTCTCCCAATCTGCTTGGATACAGTCAGGCAATATAGAAGAGAATATCCTTTTTGGCAACCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCACTGAAAAAGGACCTTGAACTTTTCTCACATGGAGACCAAACAATTATTGGTGATAGAGGTATAAACTTGAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCAAGGGCACTCTACCAAGATGCTGATATATATCTCCTTGATGACCCCTTCAGTGCAGTTGATGCCCACACTGGCTCAGAATTATTTAGGGAGTTTGTATTGACAGCATTAGCAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCTGCTGCTGATATGATACTGGTTCTTAAAGAAGGCCACATCATACAGGAAGGAAAATATGATGATCTTTTACAAGCAGGAACAGATTTTAAAGCTCTAGTTTCAGCTCACCATGAAGCAATAGAGGCTATGGACATTCCTAATCACTCAGAAGATTCAGATGAAAATGTATCCTTGGATGCATCAGTTATGTCCAGTAAGAAATCCCTTGCTTCTGCAAATGATATTGATGGTTTGGCAAAGGAAGTTCAAGAGGGATCATCTGATCATAAAGCAATTATGGAGAAGAAGAAAGCAAAACGCTCACGAAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTTAGAGGTAGAGTCAGCATGAAGGTGTACTTGTCATACATGGCTGCAGCGTATAAAGGTTTATTGATTCCACTCATAATCATTGCACAAGCATTATTTCAGTTCCTTCAGATTGCCAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAGGGAGACCAACCCAAAGTAACTCCTGCGGTTCTTCTTCTTGTTTACATGGCCCTTGCTTTTGGCAGCTCATGGTTCATATTTGTAAGGGCTGTTCTCGTGGCTACATTTGGTCTAGCAGCTGCACAGAAACTATTTTTCAACATGCTTAGAAGTATTTTCCATGCACCAATATCTTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAATCGTGTTTCAGTTGATCAAAGTGTTGTGGATCTTGACATTCCTTTTAGACTTGGAGGTTTTGCTTCATCAACAATACAGCTTATTGGCATTGTTGGCGTAATGACAGATGTTACATGGCAAATTTTGGCCCTGGTAGTCCCAATGGCTGGTGTTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTAGTACGTATCGTAAGCATCCAGAAATCTCCAATTATAAATCTTTTTGGTGAATCAATTGCTGGAGCAGCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGGAACTTGTATCTTTTGGATTGTTTTGCGAGACCATTCTTCTGCAGTCTTGCAGCTATTGAGTGGCTCTGCCTGCGCATGGAATTACTTTCAACCTTTGTATTTGCTTTCTGCATGGTATTACTTGTGAGCCTTCCTCGCGGAAGTATTGACCCCAGCATGGCTGGACTTGCTGTAACATATGGCCTGAACTTAAATGCACGTCTATCACGGTGGATACTTAGTTTTTGCAAACTTGAAAATAAGATTATATCTATTGAAAGAATTTATCAGTACAGCCAAATTCCTTGTGAAGCACCGGCAGTAATTGAAGAGTCTCGCCCTCCATCCTCATGGCCTGAGAATGGAACAATCGAATTAATTGATCTTAAGGTTCGTTACAAGGAAAGTCTTCCTTTGGTGCTTCATGGAATATCCTGCACATTTCCTGGTGGGAAGAAGATTGGAATAGTTGGACGCACTGGCAGTGGCAAATCCACTTTGATTCAAGCATTATTTCGATTGGTTGAACCTGCAAGTGGAAGTATCCTTATAGACAACATTAATATTTCAGGGATTGGCCTTCATGACCTTCGAAGCCATCTTAGTATCATACCACAAGATCCAACTTTATTTGAAGGCACCATTCGAGGCAATCTTGATCCTCTTGAAGAGCACTCTGATAAAGAGATTTGGGAGGCCCTAGATAAGTCTCAGCTTGGAGAGATCATTCGCGAGACAGGGAGAAAGCTTGATATGCCAGTGTTGGAAAATGGAGATAATTGGAGTGTAGGACAGCGGCAACTTGTTGCTTTGGGGCGAGCTTTGCTGAAGCAGTCAAAGATACTTGTGCTTGATGAAGCAACAGCATCAGTTGATACTGCTACTGATAATCTTATCCAGAAAATTATTCGACAAGAGTTTAGAGATTGCACTGTGTGCACAATTGCACACCGTATTCCTACTGTTATTGACAGTGATCTAGTCCTGGTACTCAGTGATGGTCGAGTTGCAGAGTTTGACACTCCACCCCGGCTATTAGAGGACAAGACATCCATGTTTTTAAAGTTGGTGACTGAGTATTCATCACGGTCAAGTGGCATACCAGATTTTTGA 4512 0.4242 MGVAEFLQKISASTLSSSSSSSGSSNILLNSILGLPVLELATICVNLTFVLLFIFVASVRRILVCEGGFRIGKDVNTGNASPICSVIDGETRDVRIGGGFKLSVLSCFYVLFVQVLVLGFDGGALIWGEANGKVVDWSFLSVPAAQGLAWFVLSFSALYCKFKVSEKFPFLLRIWWFLSFIICLCTLYVDGREFWVEGSKHLCSHSVANFAITPALAFLCVVAIRGVTGIQVCRNSDLQEPLLVEEEPGCLKVTPFRDAGLLSLATLSWLNPLLSLGAKRPLELKDIPLVAPKDRAKASYKVLNSNWERLKAENQNPSKQPSLAWALLKSFWKEAALNAIFAGVNTLVSYVGPYMISYFVDFLSGKESFPNEGYILSGIFFVAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSSARQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPLQIVLALVILYKNVGIAFVATLIATIISIIVTVPVAKIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIKLEEMRGVEFGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISGFLQDEELQEDATIVLPRGISNIAIEITDGVFYWDSSLPRPTLSGIHMKVEKGMTVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSVAYVSQSAWIQSGNIEENILFGNPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREFVLTALADKTVIFVTHQVEFLPAADMILVLKEGHIIQEGKYDDLLQAGTDFKALVSAHHEAIEAMDIPNHSEDSDENVSLDASVMSSKKSLASANDIDGLAKEVQEGSSDHKAIMEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDQPKVTPAVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFFNMLRSIFHAPISFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASSTIQLIGIVGVMTDVTWQILALVVPMAGVCLWMQKYYMASSRELVRIVSIQKSPIINLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSLPRGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPCEAPAVIEESRPPSSWPENGTIELIDLKVRYKESLPLVLHGISCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPASGSILIDNINISGIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEIIRETGRKLDMPVLENGDNWSVGQRQLVALGRALLKQSKILVLDEATASVDTATDNLIQKIIRQEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPPRLLEDKTSMFLKLVTEYSSRSSGIPDF* 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0371 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 336 542 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0371 1503 SUPERFAMILY ABC transporter transmembrane region 325 597 IPR036640 GO:0005524|GO:0016021
Apr8g0371 1503 Gene3D - 610 843 IPR027417 -
Apr8g0371 1503 CDD ABC_6TM_ABCC_D2 938 1232 IPR044726 GO:0140359
Apr8g0371 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 940 1210 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0371 1503 SMART AAA_5 642 823 IPR003593 -
Apr8g0371 1503 SMART AAA_5 1283 1468 IPR003593 -
Apr8g0371 1503 Gene3D ABC transporter type 1, transmembrane domain 303 598 IPR036640 GO:0005524|GO:0016021
Apr8g0371 1503 Gene3D ABC transporter type 1, transmembrane domain 899 1237 IPR036640 GO:0005524|GO:0016021
Apr8g0371 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 837 IPR027417 -
Apr8g0371 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1257 1491 IPR003439 GO:0005524
Apr8g0371 1503 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 547 1503 - -
Apr8g0371 1503 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 84 546 - -
Apr8g0371 1503 Pfam ABC transporter transmembrane region 940 1184 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0371 1503 Pfam ABC transporter transmembrane region 339 542 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0371 1503 SUPERFAMILY ABC transporter transmembrane region 937 1237 IPR036640 GO:0005524|GO:0016021
Apr8g0371 1503 CDD ABCC_MRP_domain2 1255 1475 - -
Apr8g0371 1503 CDD ABC_6TM_ABCC_D1 337 589 IPR044746 GO:0140359
Apr8g0371 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 838 IPR003439 GO:0005524
Apr8g0371 1503 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 84 546 - -
Apr8g0371 1503 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 547 1503 - -
Apr8g0371 1503 Gene3D - 1240 1493 IPR027417 -
Apr8g0371 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1248 1482 IPR027417 -
Apr8g0371 1503 CDD ABCC_MRP_domain1 615 814 - -
Apr8g0371 1503 ProSitePatterns ABC transporters family signature. 740 754 IPR017871 GO:0005524
Apr8g0371 1503 Pfam ABC transporter 1274 1422 IPR003439 GO:0005524
Apr8g0371 1503 Pfam ABC transporter 633 767 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0371 Apr-Chr8 3113561 3122909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0371 625 831 Calmodulin-binding Proteins AT2G36910 31.718 9.74e-21 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0371 - - gmx:100781010 2668.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0371 8 3113561 3122909 Apr8g0371 8 3113561 3122909 ECH
Apr4g0075 4 637628 647139 Apr8g0371 8 3113561 3122909 PCT