Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr8g0352 | ATGTCCGGCAGCAAGGTCAAGGGCCTTCTTAAAGGGTTTAGATACATATCTCAGATATTTGATAATGAAAAAGAACAAGATATACAGATTGGATATCCCACGGATGTAAAGCATGTGGCTCATATAGGGTGGGATGGTCCCTCTGTAAATTCTCCTAGCTGGATGAACGAATTTAAAACTTCTCCAGGATTTGCATCAGCACCTATAAATCTTACTGGGGATGTTCAAAATAAAGGGCAAGATAATGCAGTGAAATGGGTCTCCGAAGATTCAAGGAGAAAAAGTTCAAGATCTGTGCATTCTCAAGGAGTGGGAAGGGATTTGCCTGAATTACCTAGGGCTTCTAGAAGGCAACCAATGGGAGATTCACCAGCAAGAGAAAAGACAGAGAAAACAAGACAATCAAAAAAATCATCAAACAAAAATTCACAACCAAAGGATTCTATGGAGACACAACAATTCATGTCCCCAGACTCATCATGCTTAGGAGATGGGTCACCAGCACGAAGCTTACCAGATATCCCTAAAAAGGCTCGTAGAAAGAAATCAAAAGAGAATTCTAGTGGTGGTGGGTCATCCAAATTGAGATCTAAAGCTCAACAATTAGATTCTAATTTGGATTCTGAACCCGAATCTATGTCCAAATCTAGGATGAACAAAGGTCCTTCGAAGAAAATGAACAGTATGAACGAGAAATGA | 699 | 0.3991 | MSGSKVKGLLKGFRYISQIFDNEKEQDIQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFKTSPGFASAPINLTGDVQNKGQDNAVKWVSEDSRRKSSRSVHSQGVGRDLPELPRASRRQPMGDSPAREKTEKTRQSKKSSNKNSQPKDSMETQQFMSPDSSCLGDGSPARSLPDIPKKARRKKSKENSSGGGSSKLRSKAQQLDSNLDSEPESMSKSRMNKGPSKKMNSMNEK* | 233 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr8g0352 | 232 | Pfam | P21-Rho-binding domain | 29 | 79 | IPR000095 | - | |
| Apr8g0352 | 232 | MobiDBLite | consensus disorder prediction | 138 | 160 | - | - | |
| Apr8g0352 | 232 | MobiDBLite | consensus disorder prediction | 120 | 137 | - | - | |
| Apr8g0352 | 232 | CDD | CRIB | 28 | 61 | - | - | |
| Apr8g0352 | 232 | SMART | PBD_5 | 30 | 61 | IPR000095 | - | |
| Apr8g0352 | 232 | PANTHER | CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 | 5 | 206 | - | - | |
| Apr8g0352 | 232 | MobiDBLite | consensus disorder prediction | 87 | 232 | - | - | |
| Apr8g0352 | 232 | ProSiteProfiles | CRIB domain profile. | 30 | 43 | IPR000095 | - | |
| Apr8g0352 | 232 | PANTHER | CRIB DOMAIN-CONTAINING PROTEIN RIC8 | 5 | 206 | IPR044510 | - | |
| Apr8g0352 | 232 | Gene3D | CRIB domain | 23 | 64 | IPR036936 | - | |
| Apr8g0352 | 232 | MobiDBLite | consensus disorder prediction | 188 | 232 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr8g0352 | Apr-Chr8 | 2978435 | 2979669 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr8g0352 | - | - | cam:101503176 | 262.692 |
Event-related genes