Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0207 ATGGCGCCTAGCCGCAGAAAGGGCGCCACCAAAGCGGCGGCGGCGGCGGCCGCTCGCCGCCAATGGAAAGTCGGCGATCTTGTGCTTGCCAAAGTTAAGGGGTTCCCTGCATGGCCTGCCACGGTCAGTGAGCCAGAGAAGTGGGGTTACTCCACTGATTGGAAGAAAGTCCTTGTTTACTTCTTTGGAACCCAACAAATAGCTTTCTGCAATCCAGCTGATGTGGAAGCATTTACTGAGGAGAAAAAACAGTCTCTTCTTGGAAAGCGTCATGGAAAGGGTGCTGATTTTGTTCGTGCTGTTCAGGAGATAGTTGAGAGTTATGAGAAATTAAAAAAAGAGACTCAGCTTGATGAAACTAGCTCTGGTGGTCATGTTGCTAATGCAGATGTTTCAAATCCAGTTAACTCCTCTCCCAAGGATCAGACGGATGCTCCTGAGTTGACACATACGTTACAAATGGATTCTTCAAATTCTATTATCAACAAACATGAGGTGGTATGTGTGGCTGATGATGACTCTGCTGCTGTAGTTAAGGATGAATCTCATAATAAGGAGGCACTGTTGGAGGAGCCTATTGATAAAACTGCTGTGGTGAAATCGCCTAAGCCAGTTACTTACACTTCTCGAAAAAGATCTGTGGGTAACTTGTGCTCGCAGGGCTGTGTAACACATGAATATGCCCCAGTACGCAGGTCAAGAAACTCATCGCGGGTTCAAAACTTAATTTTTCCTTGTAGTGGCAATGGAAAAAGTGCTGGTGATCCATCAACTAATGCAGCTCAGAGTGCATCCATAAGAAAGAATAAACGTGTTAGGAAATCACCTGATCTTTCTGGCGGTAATGATTTTGAATCATCTGCTTTTGTTTCAAATGGTAGCATGGAAGATAACAGTTCCGAAATTGTCACAATTGATTCTGATACGTTTAGCTTGAATGAGGGTAGTACAATTGATTCAAATTTTAAACTTGAACACCCTGAGACTAATGAATGCCCAGAAGTTGAGTTGAACAAAGGGCTTGATCTTGAAATAAAAGCTGTAGTCAACAAGAAGAAAAGAAAACAAAATAGAAAGAGAGTGGCCAATGATGCCTCCAAGCCAGCCAGTAGATCTGAGGAGGAGACTGGTGTGCAGAATGCCAGTCAAAGTTCCCAGAATGTTTGTGGAAATTCAAAAATGAGATGCTTTGAACAAGATGGAGATGAGCACTTACCCCTTGTGAAACGAGCAAGAGTCAGAATGGGTAAATCATCTTCTGTGGAGGCAGAACTCCATAGCATTTTCCAAGGTCAAGACAAAAGCTGTAAGGAAGATACTAACTTACTGCAGCAGATGATTACATCCTCAAATTGTGAGAATGATAGCCCTGCTGATGGAGACTCAACTGTGCTGAATGGAGCCTTGGATAATGTTTCCGCCCCTTGTTCCAACACTCAGATTTGTAATACTAAGAAAGATCAAACATTCTGCTCTGTGGATGGTGAAGCTGCTTTACCTCCATCCAAACGCCTCCATCGTGCTTTAGAAGCCATGTCAGCTAATGCTGCTGAAGAAAGTCAAGCTCATGTGGAAGCATCATCCTCTATAATGACATCAAGTGGTATGTGCTATATATCTTCTGTAAGCAGGTGTCCATTTATAGCCATTAATAATCAAGAGGGAAATGTTTTAGGGCTGCAAAAGTTGGATACTTGCAACATTGATTCGTCTCATATCAATGTGTGTAGTTTCTCAACCATTTCAAATCCAGTGATTTCAACAGAGAATGAATCATCTATACAAGTGGATAAGCAGTTGACCAAGTTACAGCAGCATGAAACTGGCAAGGATGTACTCCCAGGTGCTATCGATCAAGTTGGTGAAGAGCATAGTGATCATTGTCAGACTGCCAAAGTGGATTTGAAAACTCAGTCACATGAACAAAGATCTCCTAATATTGATTCCAAATGTGGTGAAGTTGGAGGCAATCTAGATTCACCAGATCCATCATTACCACCAATTGATGAAGACAACACTGGAAATGTGAATCACTCAAATACAGCATCTGATGCATCAGAACACAATGAAATAAGCCTTGATCCTGTAATGGGTGGGAACGAAAGTGATATTTTATTACCTCAAAATAATATTGATGTGCCTGAAAATGTGGTTGCTATTTATGATGATACAGAGAGCTTGAAGGCAGCAGTTGTTGATATTAGCAAAACTGATATGAGTGAGGTTGTGAAAGAGGTAAAATGTAAAGGACCGGAGGAGGATATGAATTCTGTCTCGACATCTGATGATTTTTTGGGTGAAAAGGGTATTGTGGGCATTCGGTCAAGTCCATCCTTGATGGATGGGGGAGATTGCATTCCACAAGGATCACCTCCAACTAACTCTGTTTGCAATGTCTCTACATCAGACAGTAGTAATATTCTTCACAATGGAAGTTGTAGCCCTGATGTACATTTACACCAGAAGCAAACTTTATCTGGTCCTTATGATGGGAGTAAAGATGGGTATGTGACCACACAACAATCAAGATCTATGGGGAAGTCAAGTGAAGCAGGACGTGCTGCTTTGTTGTACTTTGAAGCCACTCTTGGGACATTGACAAGGACAAAGGAGAGTATTGGTCGAGCAACACGCATTGCTATTGACTGTGCAAAGTTTGGTATTGCATCTAAGGTCATGGAAATTCTTGCCCACAGTCTGGAAGTCGAATCAAGCCTGCATCGGAGGGTGGATTTGTTTTTTCTTGTTGACTCCATTGCACAATTTTCTCGTGGTTTAAAAGGTGATGTTTGTGGAGTATATTCATCTGCTATTCAAGCAGTCCTTCCCCGACTTTTATCTGCTGCTGCTCCTCCTGGAAATACTTCTCAAGAAAACCGTAGGCAATGTCTCAAGGTTTTAAGGCTATGGTTGGAGAGAAAAATCCTACCAGAATCCATTATTCGCCATCATATCCGGGAACTGGATTTATATAGTGCAGCTTCTGCAGCTGTCTTCTCACGACGATCATTAAGAACAGAGAGGGCTTTAGATGACCCTGTTAGAGAAATGGAGGGTATGCTTGTTGATGAATATGGAAGCAACTCAAGTTTCCAGTTGCCTGGATTTTGCATGCCCCGCATGCTTAAAGACGAAGATGATGGTGAAGAGAGTGATTCTGATGGCGGGAACTTTGAGGCAGTCACCCCCGAGCATACTTCCGAAGTACATGAAATGACTTCTGCAATTGAAAAACACAGGCATATCTTGGAAGATGTTGATGGTGAACTTGAAATGGAAGATGTGGCTCCCTGTTGTGATGTTGAAATGAATTTGAGTGGTAATGATAGAGGAAATGCTGAGCAGTTTGAGAAGAATCTGCCTGTGCCTGTTGCTCCTCTACACCAGGATGTGCCTTCATCTTCCCCACCACCACCATCTTTCCCTCCACCTCCACCCCCACCTCCACCTCCTCCACCCCCACCTCCTATCCTACACCACATGTCATCTACCTCTGATCCGTATCACACTGTAGTTAATTCAAATGGATATACTGTTTCACAGACTGCAAAAGACAACTCACTTCACTCTATGACTCAGCCCTTGGCTGCACCTAGGCAGAGTCAACCTATCAGTGATGCAGTGCACTATCAAGTCTCAGAATATAGAGAAATGCAGATGCACATGCCAGAATCTACTTGCTCTTTCAACAATTTTCCTGTACCACCTCCAGACAATTTTCGACATTCTGATGGAGTTACTATGCATAATAAAGGGTATTCTATACGGCCACCTCATCATGTGCCATCCAATCAGTTTTCTTTTGTTAACGGAGAACAGCATGTGAAACATCGAAGGGATGTTCCACCACCCCCTTCTTACTCCAGTAGACAACACTTCTTGCAGAACATGGAGAGAGAAAACTTCTATAATAATCACGAGAGATTAAAACCACCTCCATATGATTACCAAGAGAGATGGAATGTTCCTGCACCTTATCTTGATCCTCGGCATCAGGACAAAGGTGTGCCTGCCCCATATGGTTGTCATCCTTGTGAATCAACTAGAATACCAGGTCATGGGTGGAGATTTCCTACGCGGTCAATGAATCAGAGGAATTCCATGCCATTTAGACCACCCTTTGAAGATGCAATTCCAGTCGCAAACAGAGGTCCGAGCTTTTGGCGGCCTAGATGA 4176 0.431 MAPSRRKGATKAAAAAAARRQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSTDWKKVLVYFFGTQQIAFCNPADVEAFTEEKKQSLLGKRHGKGADFVRAVQEIVESYEKLKKETQLDETSSGGHVANADVSNPVNSSPKDQTDAPELTHTLQMDSSNSIINKHEVVCVADDDSAAVVKDESHNKEALLEEPIDKTAVVKSPKPVTYTSRKRSVGNLCSQGCVTHEYAPVRRSRNSSRVQNLIFPCSGNGKSAGDPSTNAAQSASIRKNKRVRKSPDLSGGNDFESSAFVSNGSMEDNSSEIVTIDSDTFSLNEGSTIDSNFKLEHPETNECPEVELNKGLDLEIKAVVNKKKRKQNRKRVANDASKPASRSEEETGVQNASQSSQNVCGNSKMRCFEQDGDEHLPLVKRARVRMGKSSSVEAELHSIFQGQDKSCKEDTNLLQQMITSSNCENDSPADGDSTVLNGALDNVSAPCSNTQICNTKKDQTFCSVDGEAALPPSKRLHRALEAMSANAAEESQAHVEASSSIMTSSGMCYISSVSRCPFIAINNQEGNVLGLQKLDTCNIDSSHINVCSFSTISNPVISTENESSIQVDKQLTKLQQHETGKDVLPGAIDQVGEEHSDHCQTAKVDLKTQSHEQRSPNIDSKCGEVGGNLDSPDPSLPPIDEDNTGNVNHSNTASDASEHNEISLDPVMGGNESDILLPQNNIDVPENVVAIYDDTESLKAAVVDISKTDMSEVVKEVKCKGPEEDMNSVSTSDDFLGEKGIVGIRSSPSLMDGGDCIPQGSPPTNSVCNVSTSDSSNILHNGSCSPDVHLHQKQTLSGPYDGSKDGYVTTQQSRSMGKSSEAGRAALLYFEATLGTLTRTKESIGRATRIAIDCAKFGIASKVMEILAHSLEVESSLHRRVDLFFLVDSIAQFSRGLKGDVCGVYSSAIQAVLPRLLSAAAPPGNTSQENRRQCLKVLRLWLERKILPESIIRHHIRELDLYSAASAAVFSRRSLRTERALDDPVREMEGMLVDEYGSNSSFQLPGFCMPRMLKDEDDGEESDSDGGNFEAVTPEHTSEVHEMTSAIEKHRHILEDVDGELEMEDVAPCCDVEMNLSGNDRGNAEQFEKNLPVPVAPLHQDVPSSSPPPPSFPPPPPPPPPPPPPPPILHHMSSTSDPYHTVVNSNGYTVSQTAKDNSLHSMTQPLAAPRQSQPISDAVHYQVSEYREMQMHMPESTCSFNNFPVPPPDNFRHSDGVTMHNKGYSIRPPHHVPSNQFSFVNGEQHVKHRRDVPPPPSYSSRQHFLQNMERENFYNNHERLKPPPYDYQERWNVPAPYLDPRHQDKGVPAPYGCHPCESTRIPGHGWRFPTRSMNQRNSMPFRPPFEDAIPVANRGPSFWRPR* 1392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0207 1391 CDD HDGF_related 20 107 IPR035496 -
Apr8g0207 1391 PANTHER PWWP DOMAIN PROTEIN 1 1391 - -
Apr8g0207 1391 Gene3D - 857 994 IPR008942 -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 372 389 - -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 636 687 - -
Apr8g0207 1391 Gene3D - 14 119 - -
Apr8g0207 1391 ProSiteProfiles CID domain profile. 851 992 IPR006569 -
Apr8g0207 1391 SMART 558neu5 858 989 IPR006569 -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 1125 1173 - -
Apr8g0207 1391 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1391 - -
Apr8g0207 1391 SUPERFAMILY Tudor/PWWP/MBT 19 121 - -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 670 687 - -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 280 295 - -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 247 266 - -
Apr8g0207 1391 Pfam PWWP domain 25 108 IPR000313 -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 247 295 - -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 351 389 - -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 114 145 - -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 1040 1068 - -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 120 145 - -
Apr8g0207 1391 MobiDBLite consensus disorder prediction 1130 1160 - -
Apr8g0207 1391 SMART PWWP_4 22 79 IPR000313 -
Apr8g0207 1391 Pfam CID domain 859 982 IPR006569 -
Apr8g0207 1391 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0207 Apr-Chr8 1665844 1678573 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0207 - - gmx:102664053 2144.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0207 8 1665844 1678573 Apr8g0207 8 1665844 1678573 ECH
Apr4g1091 4 9183431 9202653 Apr8g0207 8 1665844 1678573 PCT