Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0174 ATGATGAAGAATCAACCGTCACACTGGTGGTGGCTTGACAGCCACAGCAACACTAGACGATCCCCTTGGCTTCAATCCACACTCACTGAGCTTAGTGAGAAGACAAGGGCAATGTTAAAGTTAATTGAAGAAGATGCAGATTCCTTTGCACAACGTGCAGAGATGTATTACAAGAAGAGACCAGAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACACCGTTCATTAGCCGAGCGGTATGATCAAATAGCTGGAATTCGCCAGCTTAAAACAGGCGGATCCCCTTTTGCTTCTCCCAAGTATCATCAATCAGAGAAGTTGATGATGAGTTTTGCAGATAACAGTTATGACAGCTATTCTGAGAATTGTGATGTAGAGGAGTCTGCGGAATCAGAAGTTGATGATCCTGAGCAAGAAGAGGAAGAGGGTACCAAAATTGAGAAGTGTAGAGAAGAGGAGGAAGCTCAGTTTGAGCCTGTTAATGATGATTTGATGGGGTTGAGGAAAGAAATTAAGAGACTTAGTGAAGAGAATAAGGCTCATAAGGATCAAAGCAAGCAGAATTATAACATTTGTAGTGAAGTAATGATGTTGAGGGAAGAAAAAGAACGACTCAGAAAAGAAAATAGAGTTCAGAAGGATGAACTGAATCAGAAGGATACAATTTGTGGTGAAGTGATGAAGTTAAGGGAAGAGGTAGAAAGAGTGAGAGAAGAGAATAGGGTACTGAAGGACCATCTCAAGCAGAAAGACCAAGAGAAAATAGAGGTGATAAGACACCTTAGTTTAGCAATAGATGTGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTACTAAGGAATCTACCAAAAAATGGAAGAATCCATTTGAGTTCAACAAATTCGTGGGAGCATTGTCGGGGAAGTTGTTTAATGGGATTATTACAAGGAATAATCAGCCTAGTATTGTAGCTCTCTAG 966 0.4058 MMKNQPSHWWWLDSHSNTRRSPWLQSTLTELSEKTRAMLKLIEEDADSFAQRAEMYYKKRPELVSMVEDFYRTHRSLAERYDQIAGIRQLKTGGSPFASPKYHQSEKLMMSFADNSYDSYSENCDVEESAESEVDDPEQEEEEGTKIEKCREEEEAQFEPVNDDLMGLRKEIKRLSEENKAHKDQSKQNYNICSEVMMLREEKERLRKENRVQKDELNQKDTICGEVMKLREEVERVREENRVLKDHLKQKDQEKIEVIRHLSLAIDVLKQENVKMRSFITKESTKKWKNPFEFNKFVGALSGKLFNGIITRNNQPSIVAL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0174 321 Pfam KIP1-like protein 9 82 IPR011684 GO:0003779
Apr8g0174 321 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 7 88 IPR011684 GO:0003779
Apr8g0174 321 MobiDBLite consensus disorder prediction 125 142 - -
Apr8g0174 321 Coils Coil 196 254 - -
Apr8g0174 321 Coils Coil 165 185 - -
Apr8g0174 321 PANTHER PROTEIN NETWORKED 3A-RELATED 7 320 - -
Apr8g0174 321 MobiDBLite consensus disorder prediction 125 146 - -
Apr8g0174 321 PANTHER PROTEIN NETWORKED 4A 7 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0174 Apr-Chr8 1383881 1385614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0174 - - lja:Lj5g3v1669350.2 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0174 8 1383881 1385614 Apr8g0174 8 1383881 1385614 ECH
Apr4g0446 4 3782415 3785338 Apr8g0174 8 1383881 1385614 PCT