Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0119 ATGTTGTCTTCTATTAGATTCGTGTGGATCCTGGTGGTGTGTGCGACAGTAACATGCGCGTTGAGCCGGAGCCTGAGCCAAACACAGAAGTTGTCAGCATATGATGTTCTGGAGGAGTATGGTTTCCCAGTGGGTCTTCTTCCCAAAGGTGCCATAGGGTATGCGCTGAACAGAGAGACGGGGGAGTTTGCAGTGTATTTTGAGGAAACTTGCACTTTCGACATAGAGTCCTACAAGCTCAAATACAAATCCACCGTCACTGGAGTTATCTCCAAGGGTAGGCTCTACAATCTCAAGGGTGTCACCGTCAAGGTTTTGGTCTTGTGGCTCAACATCATCGAAGTCACTGTTAGGGGTGATGATCTCGAATTCTCTGTTGGAATTGCTTCTGCGAACTTTGGGATCGACAACTTCTACGAGAGCCCCCAGTGTGGATGTGGTTTCGACTGCAACAAACTTTCTTTAAACGGTGACGTTTCCTCCATTTAA 489 0.4744 MLSSIRFVWILVVCATVTCALSRSLSQTQKLSAYDVLEEYGFPVGLLPKGAIGYALNRETGEFAVYFEETCTFDIESYKLKYKSTVTGVISKGRLYNLKGVTVKVLVLWLNIIEVTVRGDDLEFSVGIASANFGIDNFYESPQCGCGFDCNKLSLNGDVSSI* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0119 162 Pfam Protein of unknown function, DUF538 33 138 IPR007493 -
Apr8g0119 162 Gene3D - 15 142 IPR036758 -
Apr8g0119 162 PANTHER T31J12.3 PROTEIN-RELATED 16 156 IPR007493 -
Apr8g0119 162 PANTHER DUF538 FAMILY PROTEIN 16 156 - -
Apr8g0119 162 SUPERFAMILY At5g01610-like 7 150 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0119 Apr-Chr8 940308 941220 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0119 - - gmx:100500410 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0498 4 4158852 4159371 Apr8g0119 8 940308 941220 PCT