Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0013 ATGGATACCGCTCAAAGGATCGTTGGAGTCAAGTACGAGTGCTTGCTTTTTGATGTGGATGACACACTCTACCCATTGAGCTCAGGTCTCAATTTGTCATGTTGCAAGAACATACAAGAGTATATGTTAGAACACTTGCATATTGAACAGAGTGAAGTACCAAAGATGTGCCTAGATTTATATGGGGAATATGGTACAACTATGGCAGGATTGAAGGTCCTTGGTTATGAGTTTGACAATGACGAGTTTCATGCTTATATACATGGAAGATTACCATACGAGAAACTGAAGCCTGATCCAGTATTAAGGAACCTTCTGCTTTCCATGCCCCAGCGTAAAATAATATTCACCAATGCAGATCACGCACATGCAGTTAAAGTTCTCAACAGATTGGGCTTGGAAGATTGTTTTGAGGGCATCATATGCTTTGAAACGCTTAATCCTCCCAAACAAAGATGTTTCAACTCCCACTCTCAAATCCTTTGCAAACCATCTGTGGAAGCTTTCGAAGCTGCTATTCGGACTGCTAACGTGGATCCTGAGAAAACGGTTTTCTTTGATGACAGCGCTAGAAATGTTGCAAGTGGAAAAGTAGCAGGACTTCACACTGTTATCGTGGGCCGTTCAGATCTGGTGCCTGGCGCTGATCATGCCCTGAATAGCATTCATAATATCAAAGAAGCATTGCCTGAAATATGGGAGGCTGAGGAAGGCACGCAAGAGCAAATGATCCAAACCCCAGCAGTTGAAACTATGGTCCTTGCATAG 768 0.4297 MDTAQRIVGVKYECLLFDVDDTLYPLSSGLNLSCCKNIQEYMLEHLHIEQSEVPKMCLDLYGEYGTTMAGLKVLGYEFDNDEFHAYIHGRLPYEKLKPDPVLRNLLLSMPQRKIIFTNADHAHAVKVLNRLGLEDCFEGIICFETLNPPKQRCFNSHSQILCKPSVEAFEAAIRTANVDPEKTVFFDDSARNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIKEALPEIWEAEEGTQEQMIQTPAVETMVLA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0013 255 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 11 236 - -
Apr8g0013 255 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 13 206 IPR010237 -
Apr8g0013 255 SFLD C1.5.3: 5'-Nucleotidase Like 11 236 IPR010237 -
Apr8g0013 255 PANTHER OS07G0634400 PROTEIN 9 255 - -
Apr8g0013 255 CDD HAD_5NT 14 208 IPR010237 -
Apr8g0013 255 Gene3D - 75 233 IPR023214 -
Apr8g0013 255 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 9 255 - -
Apr8g0013 255 Pfam Haloacid dehalogenase-like hydrolase 15 206 IPR041492 -
Apr8g0013 255 SUPERFAMILY HAD-like 12 233 IPR036412 -
Apr8g0013 255 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 161 206 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0013 Apr-Chr8 153572 155438 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0013 K18551 - gmx:100814291 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0608 4 5043278 5045620 Apr8g0013 8 153572 155438 PCT