Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1855 ATGCTCGAGGCGCAGCCGGTTTTGTTCAGAAAGAGCCCTTCGAGAAGGCGCTTGTTGAGGCCTGGGTTCGATACCGATGACAGGGGTTGGACCTCACTTCATGTTTGTGCTCGGAAAGGGGATCTCAAACTGGTTAAAAATCTTCTCAATGAAGGAATGGATGTCAACGTGACTGCATGGGGCCCTAAGTCAAAAGGGGTGACCCCTCTCCACCTTGCTGCTGAAGGTGGTCACATTGGAGTGATGGATGAACTGCTTGAGCGTGGTGCTGACATTGATGCCAGAACTAAGGGTGCCTGTGGCTGGACACCACTCCACATTGCAGCTAAAGAAAGGAGGAGGGATGCTGTGAAATTCTTGATAGAGAATGGAGCATTCTTGCCACCTGATATCAATGATAGCAGATTTAACCCTCCTCTTCATTACTGCCCAGGACTAGAATGGGCCTATGAGGAGATGAAGCGACTTCGACAGGAAGACTTATCTGCTGGAGAGACATCTCTGAAAGTTAATTTGCATTTCAGGGATTTGGTTGATGATTAA 543 0.4843 MLEAQPVLFRKSPSRRRLLRPGFDTDDRGWTSLHVCARKGDLKLVKNLLNEGMDVNVTAWGPKSKGVTPLHLAAEGGHIGVMDELLERGADIDARTKGACGWTPLHIAAKERRRDAVKFLIENGAFLPPDINDSRFNPPLHYCPGLEWAYEEMKRLRQEDLSAGETSLKVNLHFRDLVDD* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1855 180 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Apr7g1855 180 Pfam Ankyrin repeats (3 copies) 17 95 IPR002110 GO:0005515
Apr7g1855 180 PRINTS Ankyrin repeat signature 29 44 IPR002110 GO:0005515
Apr7g1855 180 PRINTS Ankyrin repeat signature 81 95 IPR002110 GO:0005515
Apr7g1855 180 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Apr7g1855 180 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Apr7g1855 180 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Apr7g1855 180 SUPERFAMILY Ankyrin repeat 25 143 IPR036770 -
Apr7g1855 180 SMART ANK_2a 100 133 IPR002110 GO:0005515
Apr7g1855 180 SMART ANK_2a 28 57 IPR002110 GO:0005515
Apr7g1855 180 SMART ANK_2a 65 94 IPR002110 GO:0005515
Apr7g1855 180 Gene3D - 15 173 IPR036770 -
Apr7g1855 180 Pfam Ankyrin repeat 100 125 IPR002110 GO:0005515
Apr7g1855 180 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Apr7g1855 180 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Apr7g1855 180 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 6 169 - -
Apr7g1855 180 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 6 169 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1855 23 141 Miscellaneous Gene Families AT5G02620 34.167 1.86e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1855 - - aprc:113868977 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1855 7 25849154 25852350 Apr7g1855 7 25849154 25852350 ECH