Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1852 ATGATCGAAGAAGCACTAGTGTTGAGTAGTAGCAGCATCACCAAAGCTGGTGTCATTCAATTTCCATCGCTGTTGGTGTCACCATTTCACCATCATCGTCTTCTTCGGAACAAGCCTTTCTCATCTGCGATAATTGCTCTCAGAAAAAAGGAGTTCTGTGAAAAGCTTATATCCAAAATGGCAAATTATGAAGGACAGGCATTAACTAGTGGTAGCGATGTCAGATCAGGGAATATGAGTTTTGAGCCTATTTTGGAAGATGGAGTCTTCCGATTTGATTGTTTCGTAAATGATAGAGATGCATCATATCCCAGTTTTTCTTTTGTGAATAGCAGGGTTAGAGACACGCCCATCGCTACTCACAAGGTTCCTTCATATACCCCTACTTTTGAGTGCCTTCTAGAGGAGCAAGTTGTCAATCTTAAGCTGCCTGTAGGTTCCTCCCTTTATGGAACTGGAGAAGTAAGTGGTCAGCTTGAGAGGACGGGCAGAAGAATTTTCACGTGGAACTCGGACGCATGGGGTTATGGACCTGGAACTACATCTTTGTACCAATCACATCCATGGGTTTTAGCTGTTCTTCCAAATGGCGAGGCGCTAGGAATTCTTGCCGACACTACGAGGCGCTGTGAGATTGATCTCACAAAAGAATCAACAATACAGTTTGTTGCTCCGTCCTCATATCCTGTCATAACATTTGGTCCTTTTGCTTCACCCACAGCAGTTTTGATGTCTCTATCAAAAGCAATCGGAACGGTGTTTATGCCCCCAAGATGGTCATTAGGCTATCATCAATGTCGTTGGAGCTATTTATCTGATCAGAGAGTTCTGGAGGTTGCAAAAACATTCCGGAAAAAGCACATACCTTGTGATGTGATATGGATGGATATTGATTACATGGATGGTTTTCGTTGCTTTACCTTTGACAAGGAGCGTTTTCAAGACCCAAAGTCGTTAGTGAAAGACCTTCATTATAATGGTTTTAAAGCTATTTGGATGCTTGATCCTGGAATCAAACAAGAAGAGGGTTATTTTGTATATGATAGTGGGTCTAAAAATGATGTATGGGTTCAAAAGGCAGATGGAACCCCTTTTGTTGGGGATGTGTGGCCTGGGCCTTGTGTCTTCCCTGACTATACACAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAAGAATTCATTTCTAATGGTGTTGATGGTATATGGAATGATATGAATGAACCAGCAATCTTTAAGGTTGTAACAAAAACAATGCCTGAGAGCAATGTTCATAGAGGAGATAGTGAACTTGGAGGTTGCCAGAATCATTCTTTCTATCATAATGTGTATGGTCTATTGATGGCAAGATCAACCTATGAAGGTATGAAACTAGCTAATGAAAACAAGCGTCCTTTTGTTCTCACGAGAGCTGGATTTGTTGGCAGCCAAAGGTATGCTGCAACTTGGACTGGAGATAATCTTTCAACCTGGGAGCATCTTCATATGAGTATCTCCATGGTACTTCAGCTGGGACTCAGTGGTCAGCCACTGACAGGTCCTGATATTGGTGGATTTGCTGGAAATGCAACACCTAGGCTTTTTGGAAGGTGGATGGGCATAGGTTCCTTGTTTCCTTTTTGCCGTGGGCATTCTGAAGCTGGCACCACTGATCATGAACCTTGGTCTTTCGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAAGAGGAGATACCGTCTGATACCACTTTTCTACACACTTTTTTATTTTGCTCATACTAAGGGCACTCCAGTGGCAACCCCTACTTTCTTTGCTGATCCACAAGATCCTAGCCTGAGAAAACTTGAAAATTCGTTTTTGCTTGGTCCAGTTTTAGTTTATGCAAGCACCTTACATGGTCAGGGGTTGGATAAGTTGGAGATTACTTTGCCTAAGGGGATATGGTTGAGATTTGATTTCAGTGATGTGCACCCGGATTTGCCAGCTTTATACTTGAAAGGTGGCTCAATAATTCCTGTTGGCCTCCCTCTTCAGCATGTTGGAGAAGCTAATCCCTCAGATGACTTGACACTTCTCGTGGCTTTAGATGAGTTTGGGAAAGCTGAAGGTGTTCTATTTGAGGATGATGGTGATGGATATGAATTCACCAAAGGCAATTATTTATTAACACATTATGTGGCTGAACTTCAATCGTCAGTTGTTACTGTGATTGTACACAAAACTGAAGGATCATGGGAAAGGCCTAAACGCCTTGTGCATATTCAATTATTGCTTGGTGGGGGTGCAATGCTTGATGCATGGGGAATGGATGGAGAAGTTTTGCAAGTAATTTTGCCTTCGGAAGAGGAGGTGTCAAAGTTGGTATCTACTAGTGAGAAGCAATACAGGGAATGTTTGGAAAACACAATTCCAATTCCTGATGTAGAAGGGGTTTCTGGACCCAAGGGAACTGAGCTTGTAAGAACTCCCATTGAACTGAAAAGTGGCGAGTGGGTTCTTAAATTTGTTCCCTGGATTGGGGGTAGAATCATCTCCATGATGCACATTCCTTCAGGAACACAATGGCTCCATAGTAGGATTGAGATCCATGGGTATGAGGAGTATAGCGGTATGGAGTATCGTTCTGCTGGGTGTTCTGAGGCATACTCTGTCATTGATCGAAAACTTGAGCAGGCAGGGGAGGAGGAATCTGTTGTAGTAGAGGGTGATATTGGTGGAGGACTGGTTCTTCAACGACAGATATATTTTCCAAAAAATGCCACCAATGTCATCCAGATAGACTCTAGTATACTAGCCCGCAATGTTGGAGCTGGTTCTGGAGGGTTCTCAAGGTTGGTTTGCTTAAGAGTTCACCCGACATTCAATCTTATGCACCCCTCAGAATCTTTTGTCTCATTTACTTCGGTTGATGGATCAATTCATGAAGTCTTTCCTGATGGTGGGGAGCAATTCTTCGAAGGAAACCTTATTCCTAATGGCGAGTGGAGGCTCATTGATAAATGTCTTGGCTTGGCACTGGTCAATCGTTTTAAAGTTAGTGAGGTATTCAAGTGTCTTGTTCACTGGGATAGTGGCACTGTGAACCTAGAGCTTTGGTCCGAGGATAGGCCTGTTTCAAAGCAATCCCCTCTCAGAATTTCCCATCAGTACGAGGTTATAAGAATTCCATAA 3159 0.4296 MIEEALVLSSSSITKAGVIQFPSLLVSPFHHHRLLRNKPFSSAIIALRKKEFCEKLISKMANYEGQALTSGSDVRSGNMSFEPILEDGVFRFDCFVNDRDASYPSFSFVNSRVRDTPIATHKVPSYTPTFECLLEEQVVNLKLPVGSSLYGTGEVSGQLERTGRRIFTWNSDAWGYGPGTTSLYQSHPWVLAVLPNGEALGILADTTRRCEIDLTKESTIQFVAPSSYPVITFGPFASPTAVLMSLSKAIGTVFMPPRWSLGYHQCRWSYLSDQRVLEVAKTFRKKHIPCDVIWMDIDYMDGFRCFTFDKERFQDPKSLVKDLHYNGFKAIWMLDPGIKQEEGYFVYDSGSKNDVWVQKADGTPFVGDVWPGPCVFPDYTQSKVRAWWANLVKEFISNGVDGIWNDMNEPAIFKVVTKTMPESNVHRGDSELGGCQNHSFYHNVYGLLMARSTYEGMKLANENKRPFVLTRAGFVGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPLTGPDIGGFAGNATPRLFGRWMGIGSLFPFCRGHSEAGTTDHEPWSFGEECEEVCRLALKRRYRLIPLFYTLFYFAHTKGTPVATPTFFADPQDPSLRKLENSFLLGPVLVYASTLHGQGLDKLEITLPKGIWLRFDFSDVHPDLPALYLKGGSIIPVGLPLQHVGEANPSDDLTLLVALDEFGKAEGVLFEDDGDGYEFTKGNYLLTHYVAELQSSVVTVIVHKTEGSWERPKRLVHIQLLLGGGAMLDAWGMDGEVLQVILPSEEEVSKLVSTSEKQYRECLENTIPIPDVEGVSGPKGTELVRTPIELKSGEWVLKFVPWIGGRIISMMHIPSGTQWLHSRIEIHGYEEYSGMEYRSAGCSEAYSVIDRKLEQAGEEESVVVEGDIGGGLVLQRQIYFPKNATNVIQIDSSILARNVGAGSGGFSRLVCLRVHPTFNLMHPSESFVSFTSVDGSIHEVFPDGGEQFFEGNLIPNGEWRLIDKCLGLALVNRFKVSEVFKCLVHWDSGTVNLELWSEDRPVSKQSPLRISHQYEVIRIP* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1852 1052 Gene3D glycosyl hydrolase (family 31) 103 234 - -
Apr7g1852 1052 ProSitePatterns Glycosyl hydrolases family 31 active site. 402 409 IPR030458 -
Apr7g1852 1052 SUPERFAMILY (Trans)glycosidases 248 592 IPR017853 -
Apr7g1852 1052 Pfam Domain of unknown function (DUF5110) 685 746 IPR033403 -
Apr7g1852 1052 PANTHER ALPHA-GLUCOSIDASE 74 1049 - -
Apr7g1852 1052 Pfam Glycosyl hydrolases family 31 238 667 IPR000322 GO:0004553|GO:0005975
Apr7g1852 1052 Gene3D - 664 790 IPR013780 -
Apr7g1852 1052 SUPERFAMILY Glycosyl hydrolase domain 593 652 - -
Apr7g1852 1052 Gene3D - 576 658 IPR013780 -
Apr7g1852 1052 CDD GH31_N 139 251 - -
Apr7g1852 1052 CDD GH31_glucosidase_II_MalA 251 591 - -
Apr7g1852 1052 PANTHER BNAA01G23630D PROTEIN 74 1049 - -
Apr7g1852 1052 SUPERFAMILY Galactose mutarotase-like 138 225 IPR011013 GO:0003824|GO:0005975|GO:0030246
Apr7g1852 1052 Pfam Galactose mutarotase-like 148 213 IPR025887 -
Apr7g1852 1052 Gene3D Glycosidases 254 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1852 Apr-Chr7 25808832 25820312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1852 73 1052 Glycoside Hydrolase AT3G23640 73.061 0.0 1556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1852 - - gmx:100809690 1893.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1852 7 25808832 25820312 Apr7g1852 7 25808832 25820312 ECH