Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1850 ATGGCTTCTGCATTAAGGTGTCCACCGTTTGAATTTTCTGGCAAGTACTATCATGTGTCTGAAAATGGAGGTGGGTGTATAAGGCAAACCAGTTTCTTTGAAGGCAAACCAGTGCTTAATCAAGGAATAGGCTATTCTGTGATTCTTGGTTTTGGAGCTTTCTTTGCTGTCTTCACCTCTTTCTTGGTGTGGCTGGAGAAGCGGTATGTTGGGTCCCGCCACACCTCTGAATGGTTCAACACAGCTGGTAGAAGTGTTAAGACAGGGCTCATTGCTAGTGTCATTGTGTCTCAGTGGACATGGGCTGCTACAATCCTACAAAGCTCTAATGTTGCTTGGGAGTATGGGGTTAGTGGACCTTTTTGGTATGCTAGTGGGGCTACCATTCAGGTAATGTTGTTTGGAATCATGGCTATAGAGATTAAAAGAAAGGCTCCTCATGCTCACACTGTGTGTGAAATTGTCAAAGCCCGTTGGGGAACTTCTGCACACGTTGTTTTCCTCTTTTTCTGCTTCTTGACCAACATAATTGTAACGGCTATGTTGCTGCTTGGTGGTTCTGCGGTTGTAAATGCATTAACTGGAGTGAACCTTTATGCTGCTAGCTTTCTAATACCACTTGGAGTAATTGTCTACACACTAGCGGGTGGATTGAAGGCCACATTCTTGGCAAGCTATATACATTCTGTCATAGTGCACATTGTTTTGGTCATTTTTGTCTACCTTGTCTATACGGCTAGCAGCGAGCTTGGTAGCCCTTATGTTGTTTACAATCGCTTGCTAGAGGTTGCAAGCACATCAAGAACATGTCAGGATCCTATATCACATCATGGGCAATCTTGTGGTCCTGTTGGTGGGAATCACAAAGGTTCTTACCTTACAATGCTCAGTTCAGGTGGCTTAGTTTTTGGGATTATAAACATTGTTGGCAACTTTGGTACTGTGTTTGTTGACAATGGATACTGGGTGAGTGCCATTGCTGCAAGGCCTTCATCAACTCACAAGGGCTACTTGTTGGGAGGTTTGGTCTGGTTTGCTGTGCCATTTTCTTTGGCTACATCATTGGGTATAGGAGCTTTGGCCCTTGATTTACCAATAAATGAAAGTGAAGCAGGTCGTGGACTTGTTCCCCCCGCTACAGCTGTAGCTTTGATGGGAAAAGGAGGATCTATCCTGCTTCTTACCATGCTTTTTATGGCTGTGACTTCTGCTGGTTCATCAGAGCTAATTGCGGTGTCCTCATTATGCACATATGATATTTATCGTACTTATATAAATCCTAATGCAAGTGGAAAGGAAATCCTCAAAGTGTCAAGGGGTGTTGTCCTAGGCTTTGGGTGTTTCATGGGATTGCTAGCAGTTATACTGAACAAGGCTGGAGTTTCTTTAGGATGGATGTACCTTGCAATGGGAGTTCTGATTGGCTCAGCAGTTCTTCCTATTGCTTTTATGCTTCTATGGAGAAAAGCAAATGCAATTGGAGCCATTTTTGGAACAATGGTTGGTTGTGTTTTGGGAATCATCACATGGTTGTCTGTTACAAAAATACAATATGGCAAGATAAACCTTGACACAACTGGCAGAAATGCACCAATGCTTGCTGGAAACCTTGTATCTATACTAACTGGAGGAGTAGTCCATGCCATCTGCAGCATGTTGTGGCCTCAAAACTATGACTGGAGTACCACCAAGCAAATCACACGGGTTGAAAAGGAGAAGGCTAACCTGCCAGCAGAAGAGTTTAAAGAAGAAAAGTTAACTAGAGCTAAAGCATGGATAGTGAAATGGGGTGTTGGTTTCACTGTTTTGATAGTCATACTATGGCCTATTGTCTCCCTCCCAGCAGGGGAGTTTAGTAAGGGCTACTTCTATTTTTGGGCAGTGATTGCTATAGGATGGGGTACTATTGGTTCTGCAGTGATAATTATTTTGCCACTAACGGAGAGCTGGGAAACCATTCAAACTGTCATTATGGCCATGTTTACAAATGACAGGCTCATGGAAAAGGTGGAGGAGTTAAATTTCAAGTTGCACACAATCATGCAGGCAATACCAGAAGCAGAAAGACTTTACTTACTTGAGAAAGAGAAGGCCAAAAAATTAGAAGCCTCAGAGAGAGATGCTTGTTCTCTTCTTGCTTTTGATCCCAATGGACCAAAGGAAATTCAAGAGATAGTTTAG 2181 0.4301 MASALRCPPFEFSGKYYHVSENGGGCIRQTSFFEGKPVLNQGIGYSVILGFGAFFAVFTSFLVWLEKRYVGSRHTSEWFNTAGRSVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVMLFGIMAIEIKRKAPHAHTVCEIVKARWGTSAHVVFLFFCFLTNIIVTAMLLLGGSAVVNALTGVNLYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHIVLVIFVYLVYTASSELGSPYVVYNRLLEVASTSRTCQDPISHHGQSCGPVGGNHKGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGIGALALDLPINESEAGRGLVPPATAVALMGKGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKEILKVSRGVVLGFGCFMGLLAVILNKAGVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANAIGAIFGTMVGCVLGIITWLSVTKIQYGKINLDTTGRNAPMLAGNLVSILTGGVVHAICSMLWPQNYDWSTTKQITRVEKEKANLPAEEFKEEKLTRAKAWIVKWGVGFTVLIVILWPIVSLPAGEFSKGYFYFWAVIAIGWGTIGSAVIIILPLTESWETIQTVIMAMFTNDRLMEKVEELNFKLHTIMQAIPEAERLYLLEKEKAKKLEASERDACSLLAFDPNGPKEIQEIV* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1850 726 ProSiteProfiles Sodium:solute symporter family profile. 44 516 IPR001734 GO:0016020|GO:0022857|GO:0055085
Apr7g1850 726 PANTHER UREA ACTIVE TRANSPORTER 26 689 - -
Apr7g1850 726 Pfam Sodium:solute symporter family 80 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Apr7g1850 726 TIGRFAM sss: transporter, solute:sodium symporter (SSS) family 79 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Apr7g1850 726 Gene3D Sodium/glucose cotransporter 68 612 IPR038377 -
Apr7g1850 726 CDD SLC5sbd_DUR3 45 554 - -
Apr7g1850 726 PANTHER - 26 689 IPR031155 GO:0015204|GO:0016021|GO:0071918
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1850 7 700 Organic Solute Cotransporters AT5G45380 77.825 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1850 K20989 - gmx:100784391 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1850 7 25795631 25800513 Apr7g1850 7 25795631 25800513 ECH