Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1845 ATGGGTTTGAAGGAGGATTTTGACCAGTATGCTGAGAAAGCCAAGACTTTGCCAGAGAGCACCACAAATGAAAACAAGCTTATCCTTTATGGATTGTATAAGCAAGCCACTGTTGGACCTGTCAACACCAGCCGTCCTGGAATGTTCAACATGAGGGACAGAGCTAAATGGGATGCATGGAAAGCTGTTGAAGTGAAATCCCAGGAGGAAGCAATGAACGATTACATCACTAAGGTGAAACAACTGCTGGAAGAAGCTGGCCTTGCTGTCTGA 273 0.4542 MGLKEDFDQYAEKAKTLPESTTNENKLILYGLYKQATVGPVNTSRPGMFNMRDRAKWDAWKAVEVKSQEEAMNDYITKVKQLLEEAGLAV* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1845 90 Coils Coil 65 85 - -
Apr7g1845 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Apr7g1845 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Apr7g1845 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Apr7g1845 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Apr7g1845 90 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Apr7g1845 90 Pfam Acyl CoA binding protein 5 79 IPR000582 GO:0000062
Apr7g1845 90 SUPERFAMILY Acyl-CoA binding protein 3 85 IPR035984 GO:0000062
Apr7g1845 90 PANTHER BNAA08G07670D PROTEIN 1 86 - -
Apr7g1845 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 1 86 - -
Apr7g1845 90 Gene3D - 1 89 IPR014352 -
Apr7g1845 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1845 Apr-Chr7 25740772 25742739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1845 1 87 Acyl Lipid Metabolism Gene Families AT1G31812 74.713 2.52e-44 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1845 K08762 - egr:104444221 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1845 7 25740772 25742739 Apr7g1845 7 25740772 25742739 ECH