Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1840 ATGGGTAGTAAACGGAGGAGCGTTGACGACCTTCACACGGCGGCAAGGTCCGGTGATCTCATCGCCGTTCAGTCAATTCTGTCTTCAAATCCTTTGGCCGTTAATTCCAGAGATAAGCATTCCAGAACACCTTTACATTTAGCAGCATTTTCTGGGCAAGCAGAGGTAGTCAGCTATCTCTCCAAGCACAAGGCTGATGTTGGTGCTTCTGCTATGGATGACATGGCTGCAATACACTTCGCCGCCCAGAAGGGACATTTGGAAGTTGTTCGGGCTCTACTTTCAGCTGGGGCCTCTCATAAAGCCGCCACCCGCAAAGGCATGACATCATTACACTATGCTGTTCAAGGTTCCCATCTGGAACTTGTGAAGTACTTGGCCAAGAAAGGAGCAAACCTTAGTGCCAAGACGAGGGCAGGAAAGACCCCTTTGGATCTTGCTACCAATGATGAAATCCGCTCCTTTCTGGAGGAATTTGAAAGATCAGCCAAGAACGGGGAATTGAAAAATAAAGATGAAGATAAAGCTGAAGAATCTGATCCAAAGACATCAGCATTAGGATCGGAGGGTAATTTGAAAAACAGCGAGAGAGAGAAGAGGAAGGGTAGTGAAGATGAAGCCAGAGAAGACTCGTCACAACCAAAAAAGGCGAGAGTTAAGCTTAGCCATCTCCAAAGTTCAGATGATAACCAAGAAGAAGAGATGTAG 708 0.4661 MGSKRRSVDDLHTAARSGDLIAVQSILSSNPLAVNSRDKHSRTPLHLAAFSGQAEVVSYLSKHKADVGASAMDDMAAIHFAAQKGHLEVVRALLSAGASHKAATRKGMTSLHYAVQGSHLELVKYLAKKGANLSAKTRAGKTPLDLATNDEIRSFLEEFERSAKNGELKNKDEDKAEESDPKTSALGSEGNLKNSEREKRKGSEDEAREDSSQPKKARVKLSHLQSSDDNQEEEM* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1840 235 ProSiteProfiles Ankyrin repeat region circular profile. 40 67 - -
Apr7g1840 235 PANTHER - 6 234 - -
Apr7g1840 235 SMART ANK_2a 40 69 IPR002110 GO:0005515
Apr7g1840 235 SMART ANK_2a 106 135 IPR002110 GO:0005515
Apr7g1840 235 SMART ANK_2a 73 102 IPR002110 GO:0005515
Apr7g1840 235 SMART ANK_2a 6 36 IPR002110 GO:0005515
Apr7g1840 235 PRINTS Ankyrin repeat signature 41 56 IPR002110 GO:0005515
Apr7g1840 235 PRINTS Ankyrin repeat signature 122 136 IPR002110 GO:0005515
Apr7g1840 235 MobiDBLite consensus disorder prediction 163 235 - -
Apr7g1840 235 ProSiteProfiles Ankyrin repeat region circular profile. 73 99 - -
Apr7g1840 235 ProSiteProfiles Ankyrin repeat region circular profile. 106 138 - -
Apr7g1840 235 SUPERFAMILY Ankyrin repeat 11 151 IPR036770 -
Apr7g1840 235 MobiDBLite consensus disorder prediction 192 229 - -
Apr7g1840 235 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Apr7g1840 235 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
Apr7g1840 235 Gene3D - 2 71 IPR036770 -
Apr7g1840 235 MobiDBLite consensus disorder prediction 163 182 - -
Apr7g1840 235 PANTHER ANKYRIN REPEAT PROTEIN 6 234 - -
Apr7g1840 235 Pfam Ankyrin repeats (3 copies) 73 136 IPR002110 GO:0005515
Apr7g1840 235 Pfam Ankyrin repeats (3 copies) 11 69 IPR002110 GO:0005515
Apr7g1840 235 Gene3D - 72 176 IPR036770 -
Apr7g1840 235 ProSiteProfiles Ankyrin repeat profile. 40 72 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1840 5 160 Miscellaneous Gene Families AT2G31820 35.185 6.60e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1840 - - gmx:100815134 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1840 7 25707682 25709405 Apr7g1840 7 25707682 25709405 ECH