Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1800 ATGGATCAAAATAGGGGAGAGAGCTGGAGAGAACTGATGAAGAAGATGCTTCCTCCTGGTGCTTCTGTCCCAGCTGATGCTTCTAATCTTGACTACTCTATAGCTATGGAATACGTTGGTCCACCAGTTTCATATGAAGTACCTAAAGTTGAGCCCCTTGAAGTAAACTCAAGATCAATTCCTACTGCTGAACCACTCTCTGAATCACAAAGATCAAATACTCATGGGGGGCCTATGATGGTTGAACCAATCCCTCTACCAGTGTCTCGAATTGCTGGTGTAACAAGGTCCCCTAATCAGAGTCCAAGGGTGTCAGGAAGTTCAGATTCTGTGGTTTCTGTCTTACAAAACCCAGATCTTTCTTCTGCTTCTCCTTCAGTTTCACCTGCTTCAGTTCATAATCCTCCAAGCATTCCTCCTAAGCCGGTGGTTAATGAAGCAAAGAGGGCACCCGTTGTCACTTTTAATACTGTTGATAGGTCTCAGAGGAAAGAGGTGGAGGTTGTGAAGCCAGTTTATCCAGAATATGTTGGGGTTTTAAAAGAAAGGAAGAAAAAGAAAATAAGAGTTTGTTACAGGTGTGGAAAAGGGAAGTGGGAAACTAAGGAGTCTTGCATAGTTTGTAATGCCAAGTATTGCAGCAACTGTGTGCTTAGGGCAATGGGATCAATGCCTGAAGGGCGAAAATGTGTGACATGCATCGGTCAGCCAATTGATGAATCAAAGCGTCTGAAGTTGGGCAAACATTCAAGGGTCTTGTCCAGATTGTTAAGTCCTCTAGAAGTCAAGCAGATTATGAAAGCAGAGAAAGAATGTTCTGCTAATCAGCTTCGGCCAGAGCAGTTGATTGTCAATGGATTGCCCTTGAAGCCTGATGATATGGCAGAACTACTTGGATGCCCCTTACCTCCACGTAAACTGAAGCCTGGTAGATATTGGTATGATAAAGAATCCGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAGAATCATAAGTTCAAACTTGAATTTCACTGGGAAACTTAGCCTTGATGCTAGCAATGGAAACACTGAGGTTTACATGAATGGTCGAGAGATTACAAAACTTGAATTGAGGGTACTCAAGCTAGCAAATGTGCAGTGTCCACGTGATACACACTTCTGGGTTTATGATGATGGTCGTTATGAGGAGGAAGGTCAAAATAACATCAGAGGAAACATTTGGGAGAAGGCTTCAACAAGATTTGTTTGTGCCTTATTCTCTCTACCATTTCCCCATGGACAGCCACGTGGGCCAAAGGATGAAACCAGTAATTATGCCACAGTTCCTAATTATCTGGAACCAAAAAAAATTCAGAAACTTCTTCTTCTTGGACTTCAAGGATCTGGAACTAGCACTATATTTAAGCAGGCCAAGTTCCTGTATGGGAACAAATTTTCCGCTGAAGAGCTGCTGGATGTCAAACTAATGATCCAGAGTAACATGTACAAATATCTTAGCATTTTACTTGATGGAAGAGAGCGCTTTGAAGAGGAGGTTGTTTCTAGAATGAATGGACAAGGTTCTCCTGGTCAAACTACGGAAACAGGTAGCAATGGTGACGCAAGTAATACTAGTGAGTGTATTTATTCCCTCAACCCAAGGCTAAAACATTTCTCTGACTGGCTCCTGGACATTATAGCCACTGGGGATTTAGATGCATTCTTCCCTGCAGCCACACGTGAATATGCACCATTAGTTGAAGAAGTATGGAAGGATCCAGCTATACAAGAAACCTTCAAAAGAAAAGATGAGCTTCACTTTCTTCCAGATGTTGCAGAGTACTTCTTGAGCCGGGCTGTTGAGATATCTTGCAATGAATACGAACCCTCCGAAAGGGACATACTATATGCAGAAGGGGTTACTCAGGGAAATGGTTTGGCTTTCATGGAATTCTCACTTGATGACCGTATTCCAAAGTCTGACACTTACACAGATAACCTGGATGGTCAACTACCACCTCTGACCAAGTACCAACTCATAAGGGTGAATGCCAAGGGCTTAAGTGAGGGTTGCAAGTGGGTTGAAATGTTTGAAGATGTTCGAGCAGTGGTCTTTTGCGTTTCCCTAAGTGACTATGATCAGTTATGGCTTGCACCAGACAGTAGTGGCAGTGGAACACTTATTCAAAACAAGATGATACAAAGCAAGGAGCTTTTTGAGACCATGGTGAGGCACCCTTGCTTCAAAGATACCCCTTTGGTACTAATTCTAAACAAATATGATATCTTCGAGGAAAAGATTAGCAGGGTGTCCCTAAATGCTTGTGAATGGTTCAGTGATTTTTGTCCTGTGCGTGCACATCATAACAACCAGTCATTAGCCCATCAGGCTTACTTCTGTGTTGCCATGAAATTCAAGGACCTTTATGCATCCCTCACTGGGAGAAAACTTTTTGTGGCACAAGCCAGGGCAAGGGACCGAGTAACTGTCGATGAGGCATTCAAATACATAAAAGAGGTCCTAAAGTGGGATGAAGAGAAGGATGAGAATTTCTATGGTCCACCTGAGGATTCATTTTACAGCACAGACATAAGTTCCTCTCCCTATGTCAGACAAGAGTAA 2586 0.4296 MDQNRGESWRELMKKMLPPGASVPADASNLDYSIAMEYVGPPVSYEVPKVEPLEVNSRSIPTAEPLSESQRSNTHGGPMMVEPIPLPVSRIAGVTRSPNQSPRVSGSSDSVVSVLQNPDLSSASPSVSPASVHNPPSIPPKPVVNEAKRAPVVTFNTVDRSQRKEVEVVKPVYPEYVGVLKERKKKKIRVCYRCGKGKWETKESCIVCNAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGKHSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLIVNGLPLKPDDMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFTGKLSLDASNGNTEVYMNGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFVCALFSLPFPHGQPRGPKDETSNYATVPNYLEPKKIQKLLLLGLQGSGTSTIFKQAKFLYGNKFSAEELLDVKLMIQSNMYKYLSILLDGRERFEEEVVSRMNGQGSPGQTTETGSNGDASNTSECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETFKRKDELHFLPDVAEYFLSRAVEISCNEYEPSERDILYAEGVTQGNGLAFMEFSLDDRIPKSDTYTDNLDGQLPPLTKYQLIRVNAKGLSEGCKWVEMFEDVRAVVFCVSLSDYDQLWLAPDSSGSGTLIQNKMIQSKELFETMVRHPCFKDTPLVLILNKYDIFEEKISRVSLNACEWFSDFCPVRAHHNNQSLAHQAYFCVAMKFKDLYASLTGRKLFVAQARARDRVTVDEAFKYIKEVLKWDEEKDENFYGPPEDSFYSTDISSSPYVRQE* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1800 861 MobiDBLite consensus disorder prediction 60 76 - -
Apr7g1800 861 Gene3D - 641 839 IPR027417 -
Apr7g1800 861 SUPERFAMILY FYVE/PHD zinc finger 173 234 IPR011011 -
Apr7g1800 861 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 19 857 - -
Apr7g1800 861 MobiDBLite consensus disorder prediction 56 144 - -
Apr7g1800 861 CDD G-alpha 456 832 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Apr7g1800 861 MobiDBLite consensus disorder prediction 847 861 - -
Apr7g1800 861 PRINTS Alpha G protein (transducin) signature 447 462 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Apr7g1800 861 PRINTS Alpha G protein (transducin) signature 615 637 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Apr7g1800 861 PRINTS Alpha G protein (transducin) signature 688 716 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Apr7g1800 861 PRINTS Alpha G protein (transducin) signature 741 750 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Apr7g1800 861 SUPERFAMILY Transducin (alpha subunit), insertion domain 473 625 IPR011025 GO:0007165
Apr7g1800 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 836 IPR027417 -
Apr7g1800 861 Pfam G-protein alpha subunit 443 828 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Apr7g1800 861 MobiDBLite consensus disorder prediction 93 131 - -
Apr7g1800 861 MobiDBLite consensus disorder prediction 836 861 - -
Apr7g1800 861 MobiDBLite consensus disorder prediction 512 531 - -
Apr7g1800 861 ProSiteProfiles G-alpha domain profile. 444 840 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Apr7g1800 861 MobiDBLite consensus disorder prediction 509 531 - -
Apr7g1800 861 Gene3D - 475 626 IPR011025 GO:0007165
Apr7g1800 861 SMART galpha_1 427 818 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Apr7g1800 861 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 19 857 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1800 Apr-Chr7 25404072 25411265 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1800 - - gmx:100794534 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1800 7 25404072 25411265 Apr7g1800 7 25404072 25411265 ECH