Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1783 ATGGCTTCAAAATTCAAACATGGATCATCTATGGTTCGGAAGATCACGCAGCTGAGCAATGATTTGGATCAGGAAACTGAGAACGGAGGTGTTGGTCTTGCTACCTACACGGTTCACATTCCTCCAACGCCTGATAACCAGCCTATGGAAATTTCCTTGGAGAGGTCAACTTCCCAGAGAGTGGAGGACCAGTACGCTTCAAGTTCTATGTTCACTGGTGGTTTTAACCAGCTTACGCGTGCCCATTTGAAGGACAAGGTGATTGAATCCGAATCCAGCCATCCCCAGATGGCTGGAGCAAAAGGGTCACCTTGTGCAGTGCCTGGTTGTGATGGAAAAGTGATGACTGACGAGAGGGGATTGGATATAGTCCCTTGTGAGTGTGACTATAAGATTTGTAGAGATTGTTACAGAGATGTTTTGAGGACTGGTGAAGGGATTTGCCCTGGTTGCAAAGAGCCTTATAAGGAGCCTGAGATGCAAGAGGCTTCTATGGTTAATCAACAGGCACTGCCTTTGCCTCCTGGTGCTGGGGTGTCCAAGATGGAGAGGAGGTTGTCGTTGATGAAATCAACGGCTTTGATGAGGAGCCAAACTAATGAATTTGATCATGCTCAGTGGTTGTTTGAAACCAAAGGGAGCTATGGATATGGAAATGCTATGTGGCCAAAAGATGCTGAAAATGATGCCAGTTCTGGTTCTGATTGGATGGGGGGTGATCCTAATGTTTTCAATGAAAAGCAGTGGAGGCCTTTGACCAGGAAATTGAGTATTTCTGCTGCAGTTCTCAGTCCATATAGGCTCATAATATTAGTTCGGTTAGTGGTTCTTGCTTTCTTCCTAAAGTGGAGGGTCCAAAATCCCAATGAAGATGCACTCTGGCTGTGGGGCATGTCTGTGGTTTGTGAAATCTGGTTTGCCTTCTCATGGCTGCTTGATCAGCTTCCTAAGCTCTTTCCGATAAACCGTGTGGCTGATCTCGATGTTTTGAAAGAGAAGTTTGAAACATCTAATCCTTCCAATCCTTCTGGAAAGTCTGATCTTCCAGGAATAGACATGTTTGTGTCAACTGCAGATCCAGAGAAAGAACCACCACTTGTTACTGCAAATACTATTCTTTCTATTCTAGCTGCTGATTATCCTGTTGAGAAACTTTCATGTTATGTCTCTGATGATGGAGGTGCACTTCTAACCTTTGAGGCCATGGCAGAGGCGGCAAGTTTTGCCAATTTGTGGGTTCCTTTTTGCCGGAAGCACGACATTGAACCGAGGAACCCGGAAACTTATTTTAATCTCAAGAGAGATCCTTACAAGAACAAAGTTCGCTCTGACTTTGTAAGGGACCGCAGGCGAGTAAAGCGCGAGTATGATGAGTTCAAGGTTCGGATTAATGGCCTTCCTGATTCAATCCGGCGCCGTTCTGATGCTTATAATGCTAGAGAAGAAATCAAAGCTATGAAGCTTCGTAGAGAGAATGGAAATGATGAACCAATTGAGAATTTGAAAATTCCTAAAGCTACATGGATGGCTGATGGTACTCACTGGCCAGGTACTTGGACAATTCCTTCACCAGAACATTCCAGGGGTGATCATGCCAGTATTATACAGGTAATGATAAAACCCCCAAGTGATGAACCACTGAGTGGCACAGAATCAGATTCAAATGCCATGGATTTAACAGAAGTTGATATTCGTCTTCCTATGCTTGTCTATGTTTCTCGTGAAAAACGACCTGGTTATGACCACAACAAAAAAGCTGGGGCCATGAATGCGCTGGTTCGAGCCTCAGCCATTATGTCCAATGGCCCTTTCATTCTTAATCTTGACTGTGACCATTACATATACAACTCTCAAGCCCTGAGAGAAGGGATGTGTTTCATGATGGACCGTGGTGGCGACAGGATCTGCTACGTTCAATTTCCTCAAAGGTTTGAAGGAATTGATCCTAATGATCGCTATGCCAATCATAACACTGTCTTCTTTGATGTCAACATGCGAGCTCTGGATGGAATTCAAGGTCCTGTATATGTTGGCACAGGATGCTTATTTAGAAGAACTGCACTGTATGGCTTTGATCCACCAAGGGTGAAAGAGGAGACTAGTTGGTTTGGTGGAAAGAACAAGAAATCATCAACTGTTGCCTCTGTCTCTGAAGCTGGTTCTGAGGACAAGTCACTTAGAAATGGTGGCATTGAAGAGGAAGAAATGACAATTGCTCTTATTCCAAAGACATTTGGCAACTCAAGCCTTCTTGTTGATTCAATAAGGGTGGCCGAGTTCCAAGGCCGCCCCCTGGCTGATCATCCGTCTATCAAGAATGGACGTCCGCCCGGCGCACTAACTCTTCCTCGTGATCTACTTGATGCTGCAACTGTTGCTGAGGCCATCAATGTGATCTCATGTTGGTATGAAGATAAGACTGAATGGGGCCTTAGAGTTGGGTGGATTTATGGTTCTGTTACTGAGGATGTTGTGACTGGTTATAGAATGCATAATAGGGGATGGAAGTCTGTATATTGTGTCACCAAAAGAGATGCTTTCCGTGGCACTGCTCCAATCAATCTCACAGATAGATTACATCAGGTTCTTCGATGGGCAACTGGCTCGGTTGAGATCTTCTTTTCGCGAAACAATGCTCTTTTGGCTAGCTCTAGATTGAAATTTCTGCAGAGAATTGCTTACCTTAATGTTGGAATTTATCCATTCACTTCCATATTCCTTATTGTTTATTGCTTCCTTCCAGCACTATCGCTTTTCACCGGCCAGTTCATTGTTCAGACCCTTCAAGTAACCTTCCTAGTTTACCTCTTGGGAATTACCTTGACCCTTGTTCTTCTTGCTGCTTTGGAGATCAAATGGTCTGGTATTGAACTTGAAGAATGGTGGAGGAATGAACAGTTTTGGTTGATTGGAGGCACAAGTGCTCATCTTGCTGCTGTTCTTCAGGGTCTACTAAAGGTGATGGCTGGCATTGAGATTTCATTCACTTTGACATCAAAATCTTCAGGTGACGATGAAAATGATGAATTTGCTGATCTTTATGTAATCAAGTGGACCTCTCTTATGATACCACCCATCACAATTATGATGGTCAATTTGATAGCAATTGCCGTGGCAGTTAGCAGAACAATATATAGTGATGATCGTCAATGGAGCAGTTTACTTGGAGGTGTGTTTTTCAGTTTTTGGGTCTTGACTCATTTGTATCCCTTTGCAAAAGGGCTTATGGGTAGAAGGGGTAGGACACCCACTATTGTGTTTGTATGGTCAGGTTTAATATCAATTACTATCTCACTACTCTGGGTTGCTATTGACCCTCCTTCTGGCAGCAGTCAAATTGGAGGATCATTCCAATTCCCTTGA 3363 0.4383 MASKFKHGSSMVRKITQLSNDLDQETENGGVGLATYTVHIPPTPDNQPMEISLERSTSQRVEDQYASSSMFTGGFNQLTRAHLKDKVIESESSHPQMAGAKGSPCAVPGCDGKVMTDERGLDIVPCECDYKICRDCYRDVLRTGEGICPGCKEPYKEPEMQEASMVNQQALPLPPGAGVSKMERRLSLMKSTALMRSQTNEFDHAQWLFETKGSYGYGNAMWPKDAENDASSGSDWMGGDPNVFNEKQWRPLTRKLSISAAVLSPYRLIILVRLVVLAFFLKWRVQNPNEDALWLWGMSVVCEIWFAFSWLLDQLPKLFPINRVADLDVLKEKFETSNPSNPSGKSDLPGIDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPETYFNLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIKAMKLRRENGNDEPIENLKIPKATWMADGTHWPGTWTIPSPEHSRGDHASIIQVMIKPPSDEPLSGTESDSNAMDLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQALREGMCFMMDRGGDRICYVQFPQRFEGIDPNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRVKEETSWFGGKNKKSSTVASVSEAGSEDKSLRNGGIEEEEMTIALIPKTFGNSSLLVDSIRVAEFQGRPLADHPSIKNGRPPGALTLPRDLLDAATVAEAINVISCWYEDKTEWGLRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFTGQFIVQTLQVTFLVYLLGITLTLVLLAALEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSSGDDENDEFADLYVIKWTSLMIPPITIMMVNLIAIAVAVSRTIYSDDRQWSSLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSQIGGSFQFP* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1783 1120 Pfam RING/Ubox like zinc-binding domain 107 156 - -
Apr7g1783 1120 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 550 700 IPR029044 -
Apr7g1783 1120 SUPERFAMILY RING/U-box 96 162 - -
Apr7g1783 1120 Pfam Cellulose synthase 351 1109 IPR005150 GO:0016020|GO:0016760|GO:0030244
Apr7g1783 1120 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 170 IPR013083 -
Apr7g1783 1120 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 47 1118 - -
Apr7g1783 1120 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 47 1118 - -
Apr7g1783 1120 SUPERFAMILY Nucleotide-diphospho-sugar transferases 366 693 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1783 Apr-Chr7 25183883 25188357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1783 13 1120 Glycosyltransferase AT3G03050 77.102 0.0 1797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1783 K20924 - gmx:100813900 1974.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1783 7 25183883 25188357 Apr7g1783 7 25183883 25188357 ECH