Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1747 ATGTGTCTCTCTCTGTCTTCAGCCGTTGAAGTCCCGGAGGACTCAACGAATGTTCCTTCTGCACCGAATCTGTTATCCGAAACCCTAGATGACTCTCAATTGGTACCGTCGTTCCCTAATTTAGATGGATCTTCCATTCAATCCCCCATTCGCGGCGTTTCTCCTCTTCTGGCGGACTCTGGCGACGGTATTTATGCCGACATTTTCGGTGAGGATGCTCCGCGAGAGGATCTTGGCATGTCTTCACTATTCCGGGGACTCAACGATGACTCGTCTTCGCTGTGTTCGTCGGCGTTGACTTCGAATTCGATGGTTTCTACAGTGCCGTTGGAGGCATCGAATGCTCCCCAAAGGGACTTTCTTTTCTCTGAAAATAACTTTGCGCTTTCAGAGGATGGAGTATCTGCCTCCGATGTTTCACCTTCTAGGATGGGAGCGGGTCTTTTAAACCTTGGCAACACATGCTTTCTTAATGCTATCCTGCAATGCTTTACGCACACAGTGCCCCTGGTGCAGGGTCTTCTTTCGTGCACTCATTCTACCCCTTGTGTGGGTCATATAGGTGGGTTCTGTGTTATATGTGCTCTTCGTGACCATGTTGAAAGGTCCTTAGCGGCTTCAGGAGGGACTCTTTCACCCTTGAAACTTGTGGATAACCTGAACCATTTTTCTTCTATATTTACAAGATACCAGCAGGAGGATGCCCATGAGTTTATGCAGTGTGCTTTGGATAAACTTGATAGATGTTTCGTAGATTTGAAGAAGAATAATATAAATTTTGAAGATGATAATCTTGTAGAGAAAGTATTTGGTGGACGTCTAATTAGCAAACTTCGATGTTGTGGCTGTGGCCGTATTTCTGACACCTATGAGCCTCTGATTGACCTGAGTTTAGAGATAGAAAATGTAGATTCCCTTCCATGTGCTCTGGAATCTTTTACTAAGGTGGAAAATATTGATGCGAAATTTAGATGTGAAAGCTGCAAGGAAGAGGTGTCCATGGATAAGCAACTTATGCTGGATCAAACACCTGCAGTTGCAGCATTTCATTTAAAGAGATTTAAGACAGATGGGACCCGTGTTGAAAAGATTGATAAACATGTTGATTTCCCATTGGAGTTGGACTTGCAGCCTTACACCTTTTCTAATCAAAACAATGATGTGCCCTTGAAATATGATCTATTTGCTGTTGTTGTACATATTGGATTTTCATCTACTTCTGGGCATTACTTTTGCTTTGTACGCTCTGCCCCAGACACATGGCATAAGTTGGATGATTCAAAGGTTACCAAGGTCTTGGGAGATTTTGTGCTGTCTCAGGAAGCATACATATTATTTTATGCACGACAGGGTACTCCATGGTTTTCAAGTATCATGGAATCTCAAGCACTCTGCTTGGATCCGAATACTAGTACATCTCCTAAGTCTGTTTTAGACGTTGGTGACAGCATGTATAAATCAAATTCTGTTTCAATTTCAAATGATGAAAGCAGTGAGGTTGGCGAAGCAAAAGATATTGCTGAGCCGCAGTTTGATTATTATTGTCCTGAAGGACATGATTTCCTTGAATTAAATGACACTGGAGATGCCACTCATGGCTGTGGACAGTGTCCATCTGGGTCAAACCAGCAAAGTGATGGTTTGAATGACTCTGAAACTACCAATGTCCAAGTGCAGTTTGGAAATAAAGCTATCATGAATGGTAGTGCCATGTTTGATGGAAATTCGTCTATTGGGAATGCCGTTCTTGATAATAACTATAGCTGTCAGGAAGTTGTTGATTTTAAAGAGAATGGTGGTTTCCATCCTTTAACTCCGCCCAGCTCCCCTGATTCTACTGATAAGTTCCAGATTTATCGTGATCATTTGAAGATGGAGAGTCATGGGAGCTGTAAAAGAACATCAAATAAGTTTATGGGGGATTCTGAGAGACAAGCAGCCGTGAAATACGTTAACAAGATGTCTGGCTCCAGGAAAGGCGTGTTTTTGGAATTAGTTAGTGGTCAAAAGGAAGCTTTGGACAAGAAGAGAAAAAAGATGGATTCAACTCCATATAAGAAAAGCAACACAATTGGTGTCCGCAAAAAATCAAACCATACTTCTGGCAGCCACACTGTAGCAGCTGGAGTTTCACGATGA 2139 0.4254 MCLSLSSAVEVPEDSTNVPSAPNLLSETLDDSQLVPSFPNLDGSSIQSPIRGVSPLLADSGDGIYADIFGEDAPREDLGMSSLFRGLNDDSSSLCSSALTSNSMVSTVPLEASNAPQRDFLFSENNFALSEDGVSASDVSPSRMGAGLLNLGNTCFLNAILQCFTHTVPLVQGLLSCTHSTPCVGHIGGFCVICALRDHVERSLAASGGTLSPLKLVDNLNHFSSIFTRYQQEDAHEFMQCALDKLDRCFVDLKKNNINFEDDNLVEKVFGGRLISKLRCCGCGRISDTYEPLIDLSLEIENVDSLPCALESFTKVENIDAKFRCESCKEEVSMDKQLMLDQTPAVAAFHLKRFKTDGTRVEKIDKHVDFPLELDLQPYTFSNQNNDVPLKYDLFAVVVHIGFSSTSGHYFCFVRSAPDTWHKLDDSKVTKVLGDFVLSQEAYILFYARQGTPWFSSIMESQALCLDPNTSTSPKSVLDVGDSMYKSNSVSISNDESSEVGEAKDIAEPQFDYYCPEGHDFLELNDTGDATHGCGQCPSGSNQQSDGLNDSETTNVQVQFGNKAIMNGSAMFDGNSSIGNAVLDNNYSCQEVVDFKENGGFHPLTPPSSPDSTDKFQIYRDHLKMESHGSCKRTSNKFMGDSERQAAVKYVNKMSGSRKGVFLELVSGQKEALDKKRKKMDSTPYKKSNTIGVRKKSNHTSGSHTVAAGVSR* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1747 712 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 100 579 - -
Apr7g1747 712 MobiDBLite consensus disorder prediction 685 712 - -
Apr7g1747 712 Gene3D Cysteine proteinases 143 452 - -
Apr7g1747 712 SUPERFAMILY Cysteine proteinases 145 449 IPR038765 -
Apr7g1747 712 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 100 579 - -
Apr7g1747 712 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 147 162 IPR018200 GO:0004843|GO:0006511
Apr7g1747 712 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 146 450 IPR028889 -
Apr7g1747 712 MobiDBLite consensus disorder prediction 673 712 - -
Apr7g1747 712 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 392 410 IPR018200 GO:0004843|GO:0006511
Apr7g1747 712 Pfam Ubiquitin carboxyl-terminal hydrolase 147 447 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1747 Apr-Chr7 24758580 24762462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1747 140 463 Miscellaneous Gene Families AT4G31670 34.234 3.18e-54 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1747 K11855 - gmx:100808015 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1747 7 24758580 24762462 Apr7g1747 7 24758580 24762462 ECH