Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1659 ATGAAGAGGAATACAAGTTTTTCTTTACCCTTTTTCATGTTCTTGTTGATGATTGTCTTTGTCACCTTCTCTATAATTTCTGCAGAGGCAAGGAAGACAAACATCAAGAAAAAGCTTCATAAACGTCACAAAGATAATCATAGTAGCAATGGCCACACTCGAGGAGGGTCACATCCTCCATGTCCAGCACCAGCTCCTCTTCCTCATTATGGTCCTCAAGGGAAAACTTTTGACATTTTGTCTTTTGGCGCCAAGGGAAATGGAATTGTTGATGATTCAGAGGCACTTCTAGCTGCATGGAAAGGTGCATGCAACGTTCCTGGAGCTACAGTTAAAATTCCAGCACAATTCAAGTTTCTTATCAAGCCCATTACTTTACAAGGCCCTTGTATGCCTGACCTTACTCTTCAGATAGATGGAACTCTATTGGCACTTCCTGAAGCATCTTCCTGGCCGAAATCCAGCTTGTTTCAGTGGATAAATTTCAAGTGGGTGCAGAATTTCACCATCAAAGGCTCTGGCATTGTTAATGGCCAAGGCTATAACTGGTGGAGATCCTCAGAATTGTATGATATGCAGAGTTACTCTAAACAAAGTTCAGGCATGAAGCCAACTGCTATAAGATTCTACTCCAGCAACCTTGTAACAGTTCGTGATATTAGAATCATAAACAGCCCTCTGTGCCATCTAAAATTTGACAACTCAAAGGGGATTAAAGTTAATAACATTACAATATCATCCCCAGAGAATAGCCCAAACACTGATGGCATTCACTTACAAAACACACATGACGTAGAAATTCAACGTTCTGATATTGGAACAGGAGATGACTGTGTATCCATACAAACCGGTTGCTCTAATATTCATGTCCACCACATTAATTGTGGCCCTGGACATGGTATAAGTGTAGGAGGATTAGGAAAAGACAAGAGTGTGGCATGTGTCTCTGACATCATTGTTGAGGACATTTCAATGAAAAACACTTTATATGGAGCAAGGATAAAAACATGGCAGGGAGGCATTGGTATGGTTAAAAATGTGTCATTTTCCAGAATTCAAGTCTATGATGTTATGTCTCCAATAATGATAGACCAATACTATTGTGACAAGCAAAACTGCAAGAACCAGACAGGAACTGTGGTGATTTCTGGAGTTAAGTTTGATCAAATAAGTGGGACTTATGCAATGCAACCTATCCATCTAGCTTGCAGCAATTTCATACCCTGCACAGATGTTGATTTAATAGATATTCAACTGAGACCCTCCCTCAAAAATCAAGGTTTGCAACAAGCTGTGTGCTGGAACTCTTATGGAAAATCACAAGGTCCCTTGGTGCCTTCAAGCATTGATTATTGCTTGAGAAGTGGTGGTGGATTAATCAAGAGGATAGCAAGGTCCCGTGATAAAGTATGTTACTAA 1419 0.4024 MKRNTSFSLPFFMFLLMIVFVTFSIISAEARKTNIKKKLHKRHKDNHSSNGHTRGGSHPPCPAPAPLPHYGPQGKTFDILSFGAKGNGIVDDSEALLAAWKGACNVPGATVKIPAQFKFLIKPITLQGPCMPDLTLQIDGTLLALPEASSWPKSSLFQWINFKWVQNFTIKGSGIVNGQGYNWWRSSELYDMQSYSKQSSGMKPTAIRFYSSNLVTVRDIRIINSPLCHLKFDNSKGIKVNNITISSPENSPNTDGIHLQNTHDVEIQRSDIGTGDDCVSIQTGCSNIHVHHINCGPGHGISVGGLGKDKSVACVSDIIVEDISMKNTLYGARIKTWQGGIGMVKNVSFSRIQVYDVMSPIMIDQYYCDKQNCKNQTGTVVISGVKFDQISGTYAMQPIHLACSNFIPCTDVDLIDIQLRPSLKNQGLQQAVCWNSYGKSQGPLVPSSIDYCLRSGGGLIKRIARSRDKVCY* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1659 472 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 17 460 - -
Apr7g1659 472 MobiDBLite consensus disorder prediction 36 67 - -
Apr7g1659 472 SMART pbh1 235 261 IPR006626 -
Apr7g1659 472 SMART pbh1 315 336 IPR006626 -
Apr7g1659 472 SMART pbh1 262 283 IPR006626 -
Apr7g1659 472 SMART pbh1 165 211 IPR006626 -
Apr7g1659 472 SMART pbh1 285 305 IPR006626 -
Apr7g1659 472 SMART pbh1 344 365 IPR006626 -
Apr7g1659 472 SUPERFAMILY Pectin lyase-like 69 449 IPR011050 -
Apr7g1659 472 Gene3D - 70 451 IPR012334 -
Apr7g1659 472 Pfam Glycosyl hydrolases family 28 110 422 IPR000743 GO:0004650|GO:0005975
Apr7g1659 472 PANTHER - 17 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1659 Apr-Chr7 23748808 23751527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1659 5 471 Glycoside Hydrolase AT3G26610 61.169 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1659 K01213 - gmx:100803027 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1659 7 23748808 23751527 Apr7g1659 7 23748808 23751527 ECH