Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1656 ATGGCAACGTTGCATCATCTAACGTTCGTTTCTTCTTCCTTCACTTTCCGACCAATGTCGGTTCGTTGCGACAACGAGCGCCGTGCGCTGTTTAGCCGCATTGCTCCTGTCTATGATAACCTGAATGATTTGCTGAGCTTGGGTCAGCACCGGATTTGGAAGCGAATGGCAGTTTCGTGGACTGAAGCGAAAATGGGAGACCGTGTGTTGGATTTGTGCTGTGGAAGTGGAGATTTATCGTTTCTCTTGTCCCAGAAAGTTGGCTCTGATGGAAAGGTGATTGGTCTTGATTTCTCGAGGGAGCAGTTATTGATTGCTACATCTCGGCAGCACTCGCTTTCTAACAAGTGCTTCACGAATATTGAGTGGATTGAAGGTGATGCTCTTGACTTGCCATTTTCTGACGGTTGGTTTGATGCTGTCACTGTGGGCTATGGTCTTCGGAATGTGGTTGACAAGCGTAAAGCCATACGGGAAATTTTAAGAGTCCTGAAAGCTGGGTCTAGGGTGTCTATCCTTGACTTCAATAAAAGTGATGAGTCACTAACTTCTTCAATTACGGAATGGATGATTGACAATATTGTTGTCCCTGTAGCCTCTGGTTATGGCCTTTCTGAGGAATACAGATATCTCAAGAGTTCAATAAGAGAGTTTTTAACAGGGAAGGAATTGGAGAAACTTGCTTTAGAAGTAGGATTTTCTGCTGCCCGACACTATGAGATCAGTGGAGGCCTCATGGGGTGCTTGGTAGCTAAACGTTAG 762 0.4541 MATLHHLTFVSSSFTFRPMSVRCDNERRALFSRIAPVYDNLNDLLSLGQHRIWKRMAVSWTEAKMGDRVLDLCCGSGDLSFLLSQKVGSDGKVIGLDFSREQLLIATSRQHSLSNKCFTNIEWIEGDALDLPFSDGWFDAVTVGYGLRNVVDKRKAIREILRVLKAGSRVSILDFNKSDESLTSSITEWMIDNIVVPVASGYGLSEEYRYLKSSIREFLTGKELEKLALEVGFSAARHYEISGGLMGCLVAKR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1656 253 CDD AdoMet_MTases 68 172 - -
Apr7g1656 253 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 26 253 IPR032904 GO:0042372|GO:0052624
Apr7g1656 253 PANTHER METHYLTRANSFERASE 13 253 - -
Apr7g1656 253 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 21 253 IPR004033 GO:0008168
Apr7g1656 253 Gene3D Vaccinia Virus protein VP39 33 253 IPR029063 -
Apr7g1656 253 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 253 IPR004033 GO:0008168
Apr7g1656 253 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 38 53 IPR023576 GO:0008168
Apr7g1656 253 PANTHER 2-PHYTYL-1,4-BETA-NAPHTHOQUINONE METHYLTRANSFERASE, CHLOROPLASTIC 13 253 - -
Apr7g1656 253 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 29 252 IPR004033 GO:0008168
Apr7g1656 253 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 245 IPR029063 -
Apr7g1656 253 Pfam ubiE/COQ5 methyltransferase family 27 247 IPR004033 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1656 Apr-Chr7 23725181 23728458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1656 58 190 Acyl Lipid Metabolism Gene Families AT1G48600 27.820 2.33e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1656 K23095 - gmx:100789470 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1656 7 23725181 23728458 Apr7g1656 7 23725181 23728458 ECH