Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1641 ATGTCAACAGAAGTGGAAGACATATTGACAAGAAGCAGGGTGACAACTTGGAAGAGGGCCTATGTGACATTCTTGGCTGGGAATGGTGACTATGTGAAAGGGGTGGTGGGCTTGGCAAAGGGCTTGCGAAAAGTGAAGAGCCCATACCCTTTAGTGGTTGCTGTTTTGCCTGATGTTCCTGAGGAACACCTTCAGATTTTAACGTCTCAAGGTTGCATTGTTCGCCATATTGAACCTATCTATCCTCCTCCAAACCAAATTCAGTTTGCCATGGCTTACTATGTCATCAACTACTCCAAGCTACGTATATGGAATTTTGAAGAGTACAGCAAGATGATATATTTGGATGCGGATATTCAAGTGTTTGACAACATAGACCATTTGTTTGATGCACCAAATGGGTACATGTATGCGGTGATGGATTGTTTCTGTGAGAAAACATGGAGCCACTCTCCACAATACAAGATAGGATATTGCCAACAGTGCCCTGATAAGGTTACTTGGCCTGTTGAAATGGGTTCTCCTCCTCCTTTGTACTTCAATGCTGGCATGTTCGTCCTTGAGCCAAGCACTCTTACCTACCAGAATCTTCTCACACTGAGAGTCACTCCCCCCACACCTTTTGCAGAGCTAGATTTCTTGAACATGTTCTTCCAAAATACGTACAAGCCTATACCTTTGATTTACAACCTGGTTTTAGCCATGTTATGGCGCCACCCAGAGAATGTAGAGCTTGAAAAGGTTAAGGTGGTCCACTATTGTGCAATTGGTTCAAAACCGTGGAGGTAGACTGGCAAGGAAGAAAATATGCAAAGAGAAGACATAAAGATGTTAGTAGCAAAGTGGTGCGACATTTACAACGACGAATCCCTTGATTTTAATGCTGAGATTCCTTTTATGGCAGAAGAAGAGACATTATCAAAGTCATCAATCATGGCTTCTATTCCTGAGCCCAGAATTTCCTTCATTCCTGCTCCCTCTGCTGCTTGA 990 0.4323 MSTEVEDILTRSRVTTWKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSPYPLVVAVLPDVPEEHLQILTSQGCIVRHIEPIYPPPNQIQFAMAYYVINYSKLRIWNFEEYSKMIYLDADIQVFDNIDHLFDAPNGYMYAVMDCFCEKTWSHSPQYKIGYCQQCPDKVTWPVEMGSPPPLYFNAGMFVLEPSTLTYQNLLTLRVTPPTPFAELDFLNMFFQNTYKPIPLIYNLVLAMLWRHPENVELEKVKVVHYCAIGSKPWR*TGKEENMQREDIKMLVAKWCDIYNDESLDFNAEIPFMAEEETLSKSSIMASIPEPRISFIPAPSAA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1641 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 14 328 - -
Apr7g1641 328 Pfam Glycosyl transferase family 8 23 262 IPR002495 GO:0016757
Apr7g1641 328 PANTHER GALACTINOL SYNTHASE 4 14 328 IPR030515 GO:0006012|GO:0047216
Apr7g1641 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 289 IPR029044 -
Apr7g1641 328 CDD GT8_Glycogenin 19 287 - -
Apr7g1641 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 17 292 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1641 Apr-Chr7 23556107 23558889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1641 18 328 Glycosyltransferase AT1G60470 80.255 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1641 K18819 - mnt:21410366 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1641 7 23556107 23558889 Apr7g1641 7 23556107 23558889 ECH