Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1636 ATGTATATCTCAGCAACTGAATCATTCATCTCATTTCACTTCAGCAAGGTTCGAAACTGTGATACAGCAGAAAGCAGGGTTCAAAGCTTAACTGTCATTGATGAGGAAGAAGCTGGAATTTCATTATTTCAATTAGAAGATTTGACTTCTAGTTGGTGCCCAATGGTTGTTTGTAAACCAGTTTCTATTAAGACAGCCAACAAATACTTTTCAGTTCGTAAAGTAACTCGGTCCTTGCCTTCCACTGCACTATCTTTTGTGGAGAAAGTTCCTCAAGATGCACAAAATTATCATATTACAGCTTTTAATTCAGGTGATGGATCCTCAAAATCAGATAATGAGCCATCTTCATCTAAGACCATACGGGATGTACATATTTCAATGCGGTTAATGGAGGACTTTCTTGATCTTGCTAAAGAAAATACAGAAAAGGAGCTGGAAACATGTGGTATACTTGGTGCCTGTCTTGAGAAGGGAACCCTCTACATGACTACTCTGATCATACCAAAGCAGGAATCAGCTTCCAATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATTCTAAATGAAAGGTCCCTTTATCCTGTGGGATGGATCCATACACATCCTTCTCAAAGTTGTTTCATGTCATCAGTGGATCTGCATACTCAATATTCCTACCAGGCGATGATTGCTGAGGCATTTGCCATTGTCTTGGCCCCAAAAGATACATCAAGGAGCTGTGGATTATTTCGACTAACCGATCCTGAAGGAATGAATATTCTGAAAAATTGCCACGAGACAGGATTTCATCCACATAAAGAACCAGATAATGGCAACCCCGTGTATGAGCACTGTTCCAATGTTTACAAAAACTCCAATCTAAGGTTTGAAATATTTGATTTACGCTGA 897 0.3902 MYISATESFISFHFSKVRNCDTAESRVQSLTVIDEEEAGISLFQLEDLTSSWCPMVVCKPVSIKTANKYFSVRKVTRSLPSTALSFVEKVPQDAQNYHITAFNSGDGSSKSDNEPSSSKTIRDVHISMRLMEDFLDLAKENTEKELETCGILGACLEKGTLYMTTLIIPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQAMIAEAFAIVLAPKDTSRSCGLFRLTDPEGMNILKNCHETGFHPHKEPDNGNPVYEHCSNVYKNSNLRFEIFDLR* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1636 298 MobiDBLite consensus disorder prediction 101 120 - -
Apr7g1636 298 ProSiteProfiles MPN domain profile. 124 254 IPR037518 -
Apr7g1636 298 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 121 226 IPR000555 GO:0005515|GO:0008233|GO:0008237
Apr7g1636 298 SMART pad1_6 123 251 IPR000555 GO:0005515|GO:0008233|GO:0008237
Apr7g1636 298 Gene3D Cytidine Deaminase, domain 2 102 298 - -
Apr7g1636 298 PANTHER FI19924P1 57 298 - -
Apr7g1636 298 SUPERFAMILY JAB1/MPN domain 124 253 - -
Apr7g1636 298 CDD MPN_AMSH_like 121 298 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Apr7g1636 298 PANTHER AMSH-LIKE PROTEASE 57 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1636 Apr-Chr7 23524791 23529194 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1636 K11866 - gmx:100807282 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1636 7 23524791 23529194 Apr7g1636 7 23524791 23529194 ECH