Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1618 ATGCTATGCTCTCTAATCCGTCTGCGCCGTTACGCTTCACACTCTCTACTCCCTCTCCGTCTCTTCTCTCCGATTAACCGTTTCTCCTCCGTGGCCGCCGCCATGGTTGCCCACGCCAAAGACGACGCGTACCTGAACGCGGTGATTCCGAAGCGCATCCAGTTGTTCGAGACTATTCTGGCCGAGCAACGCACCCAGCGCCTCTCTCTCTCCTCGGATCCCATCAAGGTCACTCTCCCCAACGGCAACGTTAAGGAAGCGAAGAAGTGGCTCACAACTCCTCTTGATATCGCTTGCGAAATCTCTAAGAATTTAGCTGCTAACGCTCTCATTGCCAGAGTCAATGGCGTGCTTTGGGACATGACTCGCCCGCTAGAGGAGGTCCCTCTTCGTCTTGCTGACTTTGGGGTTTTACATCGGAATGAAGCTAGTGGTGCCTTGAGTGGATTAACCCGTGTTAGGAGATTTCAGCAGGATGATGCTCATATTTTCTGCAGGGAGTCCCAGATAAAGGATGAAGTGAGAAATGCCTTGAATTTCATCAATTATGTGAATGACATATTTGGGTTCACATATGAGCTGAAACTTTCAACGAGGCCAGAGAAATATTTAGGAGATTTTGCTACTTGGGAGAAGGCTGAAAGTGCTCTTAAAGAAGCTTTAGATGATTTTGGCAAGCCTTGGCAGCTGAATGAAGGGGATGGTGCATTCTACGGACCAAAGATAGACATAAGTGTATCTGATGCATTGAGTAGGAAATTTCAGTGTGCAACTTTGCAGCTTGATTTCCAGCTTCCTGATCGGTTTAAGTTGGAATACTCAGCTGAGGATGAAGCCAAAATTGAGAGACCTGTAATGATACATAGAGCCATTCTAGGATCTGTTGAGCGCATGTTTGCCATACTTTTAGAGCACTACAAGGGTAAATGGCCCTTCTGGCTCAGTCCTCGTCAAGCGATTGTATGCCCTGTGTCAGAGAAATCACAATCTTATGCATTACAGGTGCGAGATCAAATCCACCAAGCAGGGTATCATGTTGATGCTGATACAACTGATAGGAAGATTCAGAAGAAGGTGCGAGAAGCACAGTTGGCACAATACAATTACATCTTGGTTGTTGGAGAGGAGGAAGCTAATACAGGACAGGTGAGTGTACGAGTTAGAGACAAGGCGGATCACAACGTTATGAGTATTGAGAATCTACTCAAACATTTCAGAGACGAAATTGCAGCTTTCCACTGA 1242 0.4662 MLCSLIRLRRYASHSLLPLRLFSPINRFSSVAAAMVAHAKDDAYLNAVIPKRIQLFETILAEQRTQRLSLSSDPIKVTLPNGNVKEAKKWLTTPLDIACEISKNLAANALIARVNGVLWDMTRPLEEVPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKDEVRNALNFINYVNDIFGFTYELKLSTRPEKYLGDFATWEKAESALKEALDDFGKPWQLNEGDGAFYGPKIDISVSDALSRKFQCATLQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYALQVRDQIHQAGYHVDADTTDRKIQKKVREAQLAQYNYILVVGEEEANTGQVSVRVRDKADHNVMSIENLLKHFRDEIAAFH* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1618 413 Pfam Anticodon binding domain 318 407 IPR004154 -
Apr7g1618 413 PANTHER THREONINE-TRNA LIGASE 38 126 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Apr7g1618 413 PANTHER THREONINE-TRNA LIGASE 127 412 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Apr7g1618 413 ProSiteProfiles TGS domain profile. 73 127 IPR004095 -
Apr7g1618 413 PRINTS Threonyl-tRNA synthetase signature 139 162 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Apr7g1618 413 PRINTS Threonyl-tRNA synthetase signature 240 268 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Apr7g1618 413 PRINTS Threonyl-tRNA synthetase signature 284 297 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Apr7g1618 413 PRINTS Threonyl-tRNA synthetase signature 311 323 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Apr7g1618 413 CDD ThrRS_anticodon 316 406 - -
Apr7g1618 413 Gene3D Bira Bifunctional Protein; Domain 2 115 309 IPR045864 -
Apr7g1618 413 CDD TGS_ThrRS 75 127 - -
Apr7g1618 413 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 38 126 - -
Apr7g1618 413 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 127 412 - -
Apr7g1618 413 SUPERFAMILY Class II aaRS ABD-related 304 409 - -
Apr7g1618 413 Pfam TGS domain 75 127 IPR004095 -
Apr7g1618 413 SUPERFAMILY Class II aaRS and biotin synthetases 119 303 IPR045864 -
Apr7g1618 413 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 129 311 IPR006195 -
Apr7g1618 413 Gene3D - 310 412 IPR036621 -
Apr7g1618 413 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 123 306 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Apr7g1618 413 SUPERFAMILY TGS-like 75 127 IPR012676 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1618 K01868 - gmx:100812652 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1618 7 23326424 23335980 Apr7g1618 7 23326424 23335980 ECH