Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1576 ATGCTTCCCCCCCGCTTAAGTGCCGTCGTTTCGTCCCTCATTCTATGCTGTCTCTTACCCGCCTTTTGCCTTGGAATCCGATCTTTTCCGACCACCATCGCCGCCGGCGATGCTCTCTTCCACTACGCCGAGGCGCCGGAGTACCGAAACGGGGCGGGTTGCCCCGTATCCACGACCCGTGACTCAGTCCTCTCGTGTGACCCGTCTTTGGTCCACATCGCCATGACCCTCGATTCCGGTTACCTCCGTGGCTCCATAGCCGCCGTGCACTCTGTCCTCCGCCACTCATCGTGCCCGGAAAACGTGTTCTTCCACTTTGTCGCGGCGGAGTTCGACCCGGCAAGTCCTCGGGTCCTGACACGACTGGTGAGGTCCACTTTCCCTTCGTTGAACTTCAAAGTCTACATTTTTAGAGAAGACACGGTTATAAACTTGATCTCTTCTTCGGTTCGTCAAGCACTCGAGAACCCTTTGAACTACGCAAGGAACTACCTCGGAGACATGCTTGATCCGTGTGTGGACCGAGTCATTTACCTTGACTCGGACGTTGTTGTTGTTGATGACGTTGGCAAGCTGTGGAACGTGTCACTCACCGAGTCACGTGTTATTGGTGCACCAGAGTATTGTCATGCAAATTTCACGAAGTATTTCACGGATGAGTTTTGGTTGGACCCTTTGTTGTCACGTGTGTTTGGTTCTAGAAAGGCTTGCTATTTCAACACGGGGGTGATGATCATGTACCTTGTGAGGTGGAGGGAAGGGAACTATAGGAAGAGGATTGAAAATTGGATGGAACTGCAGAGGAAGAAGAGGATTTATGAGTTGGGTTCTTTGCCTCCTTTTTTGCTTGTTTTTGCTGGGAATGTTGAGGCTATTGATCATAGGTGGAACCAGCATGGGCTTGGAGGGGATAATGTGAATGGAGTGTGTCGGTCATTGCATCCTGGGCCTGTTAGTTTGTTGCATTGGAGTGGCAAAGGGAAGCCTTGGGTTAGGCTTGATAATAAGCAACCTTGTCCGTTGGATCGACTTTGGGAGCCTTATGATTTGTATAAGCCACGCCAGTTTCAGAATAGGGTCAGGGATCAGCCTTGGAGTTTCTCTTCTTCTATGTTGGTTGGATATGCTCATGATTTGTTATGA 1143 0.5048 MLPPRLSAVVSSLILCCLLPAFCLGIRSFPTTIAAGDALFHYAEAPEYRNGAGCPVSTTRDSVLSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFVAAEFDPASPRVLTRLVRSTFPSLNFKVYIFREDTVINLISSSVRQALENPLNYARNYLGDMLDPCVDRVIYLDSDVVVVDDVGKLWNVSLTESRVIGAPEYCHANFTKYFTDEFWLDPLLSRVFGSRKACYFNTGVMIMYLVRWREGNYRKRIENWMELQRKKRIYELGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVNGVCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDRLWEPYDLYKPRQFQNRVRDQPWSFSSSMLVGYAHDLL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1576 380 Pfam Glycosyl transferase family 8 72 332 IPR002495 GO:0016757
Apr7g1576 380 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 72 347 IPR029044 -
Apr7g1576 380 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 9 370 - -
Apr7g1576 380 SUPERFAMILY Nucleotide-diphospho-sugar transferases 71 353 IPR029044 -
Apr7g1576 380 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 9 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1576 Apr-Chr7 22913195 22915697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1576 4 369 Glycosyltransferase AT1G70090 73.138 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1576 - - vra:106762685 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1576 7 22913195 22915697 Apr7g1576 7 22913195 22915697 ECH