Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1575 ATGGCTCTGTCACGTTTAGCCTCTTCTTCTTCCTGCGGATCCAATCTCCTCAAACCCTTCTCCGCCGCGTTACTTCACAGCCGTCCGATCTCCTCCGACGCGAACGCCACCCTCACCATCGAGACGTCCGTTCCCTTCACCGCCCACAATTGCGACCCTCCCTCACGCTCCGTCGACACCACTGCCTCAGAGCTCCTCTCGTTCTTCCGCGACATGGCTCTGATGCGGCGGATGGAGATCGCCGCCGATTCTCTCTACAAGGCAAAGCTAATCCGCGGGTTCTGCCACCTTTACGACGGCCAAGAAGCAGTCGCCATCGGCATGGAGGCCGGAATCACTAAAAAGGACTGCATCATCACCGCCTATCGGGACCACTGCACCTTCTTGGGCCGTGGCGGAACCCTACTTGAAGTGTTCGCGGAACTGATGGGGCGCAAGGAGGGGTGCTCCAAGGGAAAAGGTGGTTCGATGCATTTTTACAAGAAGGAGAGTGGGTTCTACGGTGGTCACGGTATTGTGGGGGCTCAGGTTCCGCTTGGTTGTGGGTTGGCTTTTGCTCAGAAGTATTCTAAGGATGAGAATGTGACTTTTGCTTTGTATGGTGATGGTGCTGCCAATCAGGGGCAGCTTTTTGAGGCTCTTAATATTGCTGCACTTTGGGATCTCCCTGCTATTTTGGTCTGCGAGAACAATCATTATGGAATGGGAACTGCTGAGTGGAGAGCTGCCAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGTTCCCGGATTGAAGGTAGATGGCATGGATGTTCTTGCTGTTAAACAAGCTTGCAAATTTGCAAAGGAACATGCTTTGAAGAATGGGCCCCTTATTCTTGAAATGGACACTTACAGATACCATGGCCACTCTATGTCTGATCCTGGCAGCACTTACCGCACCCGTGATGAAATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTAAGAAAGCTGTTATTGTCTCATGAGATTGCTGCTGAAAAGGAGCTAAAGGACATGGAAAAAGAAGCCAGAAAAGAAGTTGATGAGGCCATTGCTAAAGCAAAGGAGAGTCCAATGCCAGATCCATTTGATCTATTTACCAATGTCTACGTTAAAGGTTTAGGAGTTGAGGCTTTTGGTGTTGATAGGAAAGAAGTGAGAGCTAATTTACCATAA 1188 0.5008 MALSRLASSSSCGSNLLKPFSAALLHSRPISSDANATLTIETSVPFTAHNCDPPSRSVDTTASELLSFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAGITKKDCIITAYRDHCTFLGRGGTLLEVFAELMGRKEGCSKGKGGSMHFYKKESGFYGGHGIVGAQVPLGCGLAFAQKYSKDENVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHEIAAEKELKDMEKEARKEVDEAIAKAKESPMPDPFDLFTNVYVKGLGVEAFGVDRKEVRANLP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1575 395 Coils Coil 333 357 - -
Apr7g1575 395 CDD TPP_E1_PDC_ADC_BCADC 68 358 - -
Apr7g1575 395 MobiDBLite consensus disorder prediction 298 317 - -
Apr7g1575 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 14 395 - -
Apr7g1575 395 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 14 395 - -
Apr7g1575 395 Gene3D - 22 389 - -
Apr7g1575 395 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 55 376 IPR029061 -
Apr7g1575 395 Pfam Dehydrogenase E1 component 71 366 IPR001017 GO:0016624
Apr7g1575 395 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 63 375 IPR017597 GO:0004739|GO:0006086|GO:0043231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1575 Apr-Chr7 22887051 22894190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1575 1 395 Acyl Lipid Metabolism Gene Families AT1G24180 79.597 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1575 K00161 - gmx:100816737 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1575 7 22887051 22894190 Apr7g1575 7 22887051 22894190 ECH