Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1574 ATGGCCATGGCCACGACCACCAACACCCAACTTATCCTCTCACTCCAACCACGCTACCCTTCTTTCACATTTCTTGCTGCCACTTCTACCTCTCTCCCATTCTCTCTCGTTCGGTTTCCATCCCTTCCTCTTTCCCTCAAATTCCGAGCCTCATTCTCCTTCAAGTCCCCAACCTCTACCCTCCGCTCCTTCTCCGATGCCGAGGAAGACGAAGAAGAATACGACGACGAAGACGAAGAAGATGATGATGAAGAAGAAGAAGACGTTGCTGCCGATGAATACGACGACGTATCCGGCGAGATTTCCGACGAAGGCGAGACGCTCGAGGCCGATGCGTTGGCTCGATACGACGGATTCAAGTGGCAGAGAGTAGAGAAGCTCTGCAACGAAGTTAGGGAGTTCGGCGCTGAAATCATCGACGTCGACGAGCTTGCCTCTGTTTACGATTTCCGCATAGACAAGTTTCAGCGGCAAGCGATACAGGCTTTTCTGAGAGGTTCGTCGGCGGTGGTTTCCGCTCCGACGAGCAGCGGAAAGACGTTGATTGCGGAAGCTGCCGCGGTGGCCACGGTGGCTAGGGGACGGCGAATATTCTACACGACTCCACTCAAGGCGTTGTCCAATCAGAAGTTCCGCGAATTCCGGGAGACTTTTGGCGACAGTAACGTTGGCCTTCTCACCGGTGATTCTGCCGTCAACAAGGATGCTCAGGTTTTGATTATGACCACGGAGATATTACGCAACATGTTGTATCAGAGTGTTGGAAATGTTTCATCTGGAAGTGGACTTGTAGATGTTGATGTGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCCCGTGGTACAGTCTGGGAGGAGATCGTTATTTATTGCCCCAAAGAAGTTCAACTTATTTGTCTGTCAGCAACTGTTGCAAATCCGGATGAGCTGGCTGGTTGGATTGGTCAGATTCATGGTGAAACAGAATTGGTAACATCATCAAAACGCCCAGTTCCATTGACTTGGCATTTCTCTATGAAGAATTCCTTATTACCACTTCTCAATGAGAAAGGAACGCACATGAACAGGAAGCTGTCTCTCAATTATTTACAACTTCAAGCTGCAGGGGCTAAACCTTACAAGGATGATTGGTCTAAAAAAAGGAATTCCCGTAGACGAGGAACTTACACAAGCTATGATAGTGACGATAGCATGTTTGAACAACGTTCTCTCTCAAAGAATAACATAAATGCAATCCGTCGTTCACAAGTTCCTCAAATAATTGATACATTATTGCAACTTCAGTATAGGGATATGCTGCCAGCTATTTGGTTTATTTTTAGCAGGAAGGGTTGTGATGCGGCTGTGCAATATGTTGAAAATTGCAAACTTCTAGATGAGTGTGAAACAAGTGAGGTTGAACTAGCCTTGAAGAGGTTCCGCATGCAGTATCCTGATGCTGTCAGAGAAACAGCTGTGAGAGGACTTTTGCAAGGGGTTGCTGCACATCATGCTGGATGTCTACCTTTGTGGAAGGCATTCATAGAAGAGTTGTTTCAAAGAGGACTTGTCAAGGTAGTTTTTGCTACAGAAACCCTAGCTGCTGGAATCAATATGCCTGCTAGAACAGCTGTTATTTCATCCCTCAGCAAAAGAGGTGATACCGGACGTATCTCATTAAGCTCAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGACGCAGAGGCATTGATGAAAGTGGTCATGTAGTCCTCATCCAAACTCCTAATGAAGGTGCTGAAGAGTGCTGCAAGGTGCTGTTTGCTGGACTTGAGCCTCTAGTCTCACAGTTTACCGCCTCATATGGAATGGTTTTGAATCTTCTTGCTGGTGTGAAAGCCATTCATAGGTCAAATGAATCAGATGATACGAGACCTTCCACAGGGAGAACATTGGAAGAAGCTAGGAAATTAGTTGAGCAGAGTTTTGGAAATTATGTTAGTAGTAATGTAATGCTGGCTGCTAAAGAGGAACTGAATAAAATTGAGAAAGAAATTGAGTTACTGATGTTAGAAATCAGTGATGAAGCCATAGATAGAAAAAGCAGGAAGGCTTTGTCACAGCGACAATACAAGGAAATTGCAGAGTTACAGGAAGATTTAAGGGCAGAAAAACGGGTTCGTTCTGAATTGCGGAAACAAATGGAAGCAAAGAGAATATCTGCCCTGAAACCTTTGTTGGAGGAGCCCGAAAGTGGACATCTACCATATTTGTGCTTGCAGTATAGGGATTCTGAAGGAGTTCAACATCCAATTCCTGCCGTGTTTTTGGGGAAAGTTGACTCCCTTAATGCTTCAAAACTCAAAAATATGATTACTTCTGTCGATTCTTTTGCATTAAATTTGGCAAATGCAGAGCCTAGTGCTACTGATTCTGAGTTGAAAGAAGATCTTGAACCATCCTATCATGTGGCTCTTGGTTCAGATAACTCTTGGTATCTATTTACAGAAAAGTGGATCAAAACAGTATATGGGACAGGTTTTCCTAATGTTCCATTGGCTCAAGGGGATGCTCGACCTCGAGAAATTATGAGTGAACTCCTTGACAAGGAGGACATGAAGTGGGATAAGCTTGCTCACTCTGAACATGGTGGTTTATGGTTCACGGACGGATCTCTGGAGACATGGTCTTGGAGCTTGAATGTTCCTGTTTTAAGTAGCTTGTTAGAAAATGATGAGCTACTGCTAAAGTCTCAACCCTATAAAGATGCCATTGAACGTTACAAGGAACAAAGAAATAAAGTTGCACGCCTGAAGAAAAGGATAGCTCGTACTGAAGGCTATAAAGAATATAATAAAATCATAGACGCAGTCAAGTTTACTGAGGAGAAAATCAAGCGTCTGAAGAATAGGTCTGAACGTTTGATTAATCGGATAGAACAAATTGAACCCTCGGGTTGGAAGGAGTTTATGCAGGTTAGCAATGTGATACATGAAACCAGAGCTTTAGATATTAATTCGCATGTCATATTTCCGCTTGGTGAAACCGCGGCTGCGATTCGAGGAGAAAATGAGCTATGGCTTGCGATGGTTCTTCGCAATAAAATTTTACTAGAATTAAAACCTGCTCAACTTGCTGCAGTGTGTGCAAGTTTGGTGTCGGAGGGTATAAAAGTCCGACCCTGGAAGAATAACAGTTACATTTATGAACCTTCTGCAACTGTGGTTAATTTCATAAGGTTATTGGATGAGCAAAGAAGTGCCCTGTTGGCAATTCAGGATAAACATGGGGTGACAATCTCATGCTGTTTGGATACCCAGTTTTGTGGTATGGTTGAGGCCTGGGCTTCCGGGTTGACATGGAGAGAAATAATGATGGATTGTGCGATGGATGACGGTGATTTAGCTCGCCTCCTTCGACGGACCATTGATCTTTTAGTTCAGGTTCCAAAATTGCCAGATATTGATCCGTTGTTGCAGCGCAATGCAAAGGCTGCTTCTGATATCATGGATCGGCCTCCAATAAGTGAACTCGCAGGGTAA 3507 0.442 MAMATTTNTQLILSLQPRYPSFTFLAATSTSLPFSLVRFPSLPLSLKFRASFSFKSPTSTLRSFSDAEEDEEEYDDEDEEDDDEEEEDVAADEYDDVSGEISDEGETLEADALARYDGFKWQRVEKLCNEVREFGAEIIDVDELASVYDFRIDKFQRQAIQAFLRGSSAVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGSGLVDVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGETELVTSSKRPVPLTWHFSMKNSLLPLLNEKGTHMNRKLSLNYLQLQAAGAKPYKDDWSKKRNSRRRGTYTSYDSDDSMFEQRSLSKNNINAIRRSQVPQIIDTLLQLQYRDMLPAIWFIFSRKGCDAAVQYVENCKLLDECETSEVELALKRFRMQYPDAVRETAVRGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDTGRISLSSNELLQMAGRAGRRGIDESGHVVLIQTPNEGAEECCKVLFAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESDDTRPSTGRTLEEARKLVEQSFGNYVSSNVMLAAKEELNKIEKEIELLMLEISDEAIDRKSRKALSQRQYKEIAELQEDLRAEKRVRSELRKQMEAKRISALKPLLEEPESGHLPYLCLQYRDSEGVQHPIPAVFLGKVDSLNASKLKNMITSVDSFALNLANAEPSATDSELKEDLEPSYHVALGSDNSWYLFTEKWIKTVYGTGFPNVPLAQGDARPREIMSELLDKEDMKWDKLAHSEHGGLWFTDGSLETWSWSLNVPVLSSLLENDELLLKSQPYKDAIERYKEQRNKVARLKKRIARTEGYKEYNKIIDAVKFTEEKIKRLKNRSERLINRIEQIEPSGWKEFMQVSNVIHETRALDINSHVIFPLGETAAAIRGENELWLAMVLRNKILLELKPAQLAAVCASLVSEGIKVRPWKNNSYIYEPSATVVNFIRLLDEQRSALLAIQDKHGVTISCCLDTQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLVQVPKLPDIDPLLQRNAKAASDIMDRPPISELAG* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1574 1168 Coils Coil 909 936 - -
Apr7g1574 1168 Pfam DSHCT (NUC185) domain 997 1163 IPR012961 -
Apr7g1574 1168 Gene3D - 332 602 IPR027417 -
Apr7g1574 1168 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 44 1164 - -
Apr7g1574 1168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 585 IPR027417 -
Apr7g1574 1168 MobiDBLite consensus disorder prediction 376 393 - -
Apr7g1574 1168 Gene3D - 946 1160 - -
Apr7g1574 1168 Coils Coil 695 722 - -
Apr7g1574 1168 MobiDBLite consensus disorder prediction 62 102 - -
Apr7g1574 1168 Gene3D - 114 331 IPR027417 -
Apr7g1574 1168 Coils Coil 660 680 - -
Apr7g1574 1168 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 160 324 IPR014001 -
Apr7g1574 1168 MobiDBLite consensus disorder prediction 376 396 - -
Apr7g1574 1168 Coils Coil 67 87 - -
Apr7g1574 1168 SMART helicmild6 485 571 IPR001650 -
Apr7g1574 1168 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 44 1164 - -
Apr7g1574 1168 Coils Coil 939 966 - -
Apr7g1574 1168 SMART ultradead3 148 338 IPR014001 -
Apr7g1574 1168 CDD SF2_C_Ski2 415 583 - -
Apr7g1574 1168 Pfam DEAD/DEAH box helicase 155 307 IPR011545 GO:0003676|GO:0005524
Apr7g1574 1168 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 433 617 IPR001650 -
Apr7g1574 1168 SMART DSHCT_2 993 1167 IPR012961 -
Apr7g1574 1168 MobiDBLite consensus disorder prediction 66 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1574 Apr-Chr7 22860189 22867197 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1574 K26077 - gmx:100780908 1941.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1574 7 22860189 22867197 Apr7g1574 7 22860189 22867197 ECH