Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1572 ATGTCCTCCAGGCGCCACTCGCTCAGCGGCCCTCCCCAACTCGCCGCCACCGGGTCGACTCAGGACCTCCGGCAACGAGTCATTACTTGCCTCAACAAGCTTTCCGACCGCGACACCCTCGCCGGCGCCGCCGCGGAGCTAGAGTACATCGCCCGAACCCTAAGCCACGACTCATTCTCCTCTTTTCTCTCCTGCATTCACAACACTGATTCCTCTTCCAAATCGCCGGTTCGCAAACAATGCGTTCACCTCTTGAACCTTCTCTCGCGCTTCCACGGCAACGCTCTTTCCCCTTTCATTTCCAAGATGATCGCCACCGTCCTCCGCCGCCTCCGCGACCCCGACTCCGCCGTCCGATCCGCATGCGTCGACGCCGTCGCCTCCATGTCCTCGCGGATCACCCGGCCGCCGTTCTCCGCCGCGTTCCTGAGGCCGCTCATGGACGCACTGGCGCAGGAGCAGGACGCCAATGCACAGATCGGTGCCGCGCTGTGCCTCGCGGCGGCGGTTGATGCGGCGCCGGACCCGGACGTTGACGCGCTCCGGAGGAGCGCGCTGCCGAAGCTTGGGAAGCTCGTGAAGAACGACGCGTGCAGAGCAAGGGCGGCGCTGCTGGTGCTGATCGGAAGTGTGGTCGCCGCCGGCGGCGCTTCGAGTCGCGGAGCGATGAATTGGTTGGTGCCGTGCCTCGTTGAGTTCCTCGGCAATGAGGATTGGACGGTGAGAAAAGCTTCGGCCGAGGCGCTGGGGAAGGTGGCTTCGGTGGAGAAAGATTTGGCAGTGCAGCATAGGGTTCTGTGTTTGGATTCATTGCAGAATCGAAGGTTTGATAAGATCAAAGTAGTTCGTGAGACTATGAATCGTGCTTTGGAGATGTGGAAGGATGTGTCTGAGGATGTTCCTGCTTCGGCTAAGTCTGAATGTGCTTCAGTTGGCACAGATAATGGTGAAGGTCAGGTGCTCCCTATAAGTTCTCCTAATGTTGGCTTTAAATCTTCTCAATCAAAGAAAACAGTCCCTGCTAACAGGTCCCCTCCATCTTCGGTTTCATTCATATCCAACATGAAAAGAGAGAGTTCTCTAAAGAGTAATGACAAAAATTCAAGAATAGGGACATTGCATCAGCAGGATCGTGAGAAATCCTTAGATGAAAAACTTGAAACCCCAGTAAGGTCCTCCCCCTCGAATATGTCTAGGGAGGATGATATTAAAAGGTGTGATTTTGAAGTTTCTAAGCCAATCCCATACAAAAATGGGGTATATTCGAGGGCAGATATAAAGCGTGTTCTCTTTAGCAAGATGTCAGATGAAAAAATGAGGAGATTCAGTGGTTCAAAATCTCGTGTGGTTCCATGTTATGGTGACGACAATCTTGATGTAGATGTTATAGTCAACAATGTACATGATGTTTGTGAGAACCTACAAGATGTGGAGGATTTTTCTTTGATCCGTGAACAACTTATTCAAATTGAAAACCAACAGTCAAATCTATTAGACCTTCTCCAGAGATTTATTGGAAGCTCCCAAAGTGGTATGAATTCCCTGGAGACACGTGTACATGGCCTAGAGATGGCCCTGGATGAAATATCATATGATTTGGCAGTTTCAAGTGGCAGGATTCCCAATACTGATGCCACAGAAGACACGTGTTGCAAGCTACCTGGTACTGACTTCTTGAGTTCTAAATTCTGGAAGAAGACAGAAGGTCGATATTCAGCATCAAGGTTCTCTTTCGGAGGCATAGCATCTACAAATGTTGTGCATAATGCAATCGACAAAGATGGAAGCAAAGAAATATTAGCTGCAAATAACAAAAGATTGCAGCTTGGTAAGGGTGCATATTTTGTGAACCCGTTGGCAGAAGTTCAAAGCGATTTGAAGGGGTATTCAGGGCATCATTCGTATAAAATGTCTAAAAACATGGTCCAAGATGCGGAGAGAGCACAAAGTAACAATGCCAGCAGCAGATATGATGGGATTCAACCAGCTAGTGAAGCACCGCGAAACCAGAATATCAGGTCATCCGTGTAG 2031 0.5012 MSSRRHSLSGPPQLAATGSTQDLRQRVITCLNKLSDRDTLAGAAAELEYIARTLSHDSFSSFLSCIHNTDSSSKSPVRKQCVHLLNLLSRFHGNALSPFISKMIATVLRRLRDPDSAVRSACVDAVASMSSRITRPPFSAAFLRPLMDALAQEQDANAQIGAALCLAAAVDAAPDPDVDALRRSALPKLGKLVKNDACRARAALLVLIGSVVAAGGASSRGAMNWLVPCLVEFLGNEDWTVRKASAEALGKVASVEKDLAVQHRVLCLDSLQNRRFDKIKVVRETMNRALEMWKDVSEDVPASAKSECASVGTDNGEGQVLPISSPNVGFKSSQSKKTVPANRSPPSSVSFISNMKRESSLKSNDKNSRIGTLHQQDREKSLDEKLETPVRSSPSNMSREDDIKRCDFEVSKPIPYKNGVYSRADIKRVLFSKMSDEKMRRFSGSKSRVVPCYGDDNLDVDVIVNNVHDVCENLQDVEDFSLIREQLIQIENQQSNLLDLLQRFIGSSQSGMNSLETRVHGLEMALDEISYDLAVSSGRIPNTDATEDTCCKLPGTDFLSSKFWKKTEGRYSASRFSFGGIASTNVVHNAIDKDGSKEILAANNKRLQLGKGAYFVNPLAEVQSDLKGYSGHHSYKMSKNMVQDAERAQSNNASSRYDGIQPASEAPRNQNIRSSV* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1572 676 Pfam HEAT repeat 226 255 IPR000357 GO:0005515
Apr7g1572 676 ProSiteProfiles HEAT repeat profile. 226 264 IPR021133 -
Apr7g1572 676 MobiDBLite consensus disorder prediction 308 358 - -
Apr7g1572 676 MobiDBLite consensus disorder prediction 1 20 - -
Apr7g1572 676 SUPERFAMILY ARM repeat 23 298 IPR016024 -
Apr7g1572 676 Gene3D - 13 384 IPR011989 -
Apr7g1572 676 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 3 660 - -
Apr7g1572 676 MobiDBLite consensus disorder prediction 648 676 - -
Apr7g1572 676 MobiDBLite consensus disorder prediction 371 387 - -
Apr7g1572 676 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 660 IPR033337 GO:0005874|GO:0008017
Apr7g1572 676 Coils Coil 483 503 - -
Apr7g1572 676 MobiDBLite consensus disorder prediction 307 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1572 Apr-Chr7 22800518 22805343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1572 - - gmx:100781440 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1572 7 22800518 22805343 Apr7g1572 7 22800518 22805343 ECH