Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1557 ATGAAGAGGGGTAAACTAGACCCGTTTGTGCTACCCAATAGGTTCACACTGCTTCAAATTTTTATGGTGGTGATACTTCTTTACTTGCTCTTCATGAGCTTCGAAATCCCCCTTGCTTTCAGAGCTGGGTTTGGTTCTGAAAATGGTGCTTTTGGGTTTCTCACCGACGCATTGCCCGTGCCCATGCCAGTGTTGATAGAAGAACCGCAAGAGAAGCTTGAAATTCGAGAACCCAAAGGAAAAAAGTTGAAGAAAGTTTCGACCTTGAGCTTCAATGGTAGCTTCTCTGAGGATTCTGAACTGCACAAGGTGGCGAGGCACGCTTGGCTCGCGGGGAAGAAGCTCTGGGGGGAAGTGGAAAGTGGGAAAGTTGAAAGCTTTGCGAAGGTTAATGTTGAAAACGGGTCGAACTCGTGCCCCAGTTCGGTTACGGTTTCTGGGTTGGAGTTTCGAGAACGGTTCAAGGGTGTGATGGTGTTGCCTTGTGGTTTGACTCTTTGGTCGCACGTGACTGTGGTGGGGACCCCACGTTGGGCGCATGCGGAGAGGGACCCGAAGATAGCGGTGGTGAAGGATGGGGATGAGGCGGTGCTGGTGTCACAGTTCATGATGGAGTTGCAAGGGTTGAAAGCAGTGGACAAGGAGGAACCACCTAGGATTCTGCATTTCAATCCGAGGTTGAGAGGGGATTGGAGTGGGAAACCTGTGATTGAACAGAACACTTGCTATAGGATGCAGTGGGGTTCTGCTCTAAGGTGTGAGGGGTGGAAGTCTCGTGCGGATGAGGAAACTGTTGATGGACACGTAAAATGTGAGAAGTGGATTCGTGATGACGATAATCGTTCTGAAGAGTGGAAGGCAACGTGGTGGCTAAACAGATTGATAGGGCGAAAAAAGGTGGTGACTGTAGACTGGCCATATCCTTTTGTAGAGGGTAAGTTATTTGTTCTCACCATAAGTGCTGGCTTGGAGGGTTACCATGTTAGCGTGGATGGGAGGCATGTGACGTCCTTTCCCTATCGCACGGGATTTGCTCTTGAGGATGCTACTGGACTATCCATAAATGGGGATGTTGATGTGCACTCTATATTTGCTGCTTCCTTGCCTATGTCGCATCCTAGCTTTGCTCCACAGATGCACCTTGAATTGCTTCCTCAGTGGAAAGCTCCTCCTCTTCCCGATGTGAATGTGGAGCTTTTCATTGGTATCCTTTCAGCTGGGAACCATTTTGCTGAACGGATGGCATTGAGGAAGTCTTGGATGCAACATAACCTAATCAGATCTTCACACGTTGTGGCTCGATTTTTTGTAGCCTTGCATGCAAGGAAGGATATAAATGTGGACATAAAGAAAGAAGCAGAGTATTTTGGTGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATTGCTATCTGTGAATATGGGACTCGTACAGTGGCTGCGAAGTATATCATGAAGTGTGATGATGACACATTTGTTAGAGTGGATTCTGTCATGAGTGAAGCCAGACAAGTTCAAAGTGATAGAAGTCTTTACATGGGAAATATGAATTACCACCATAGACCTTTTCGCCATGGGAAATGGGCTGTAACTTATGAGGAATGGGTAGAGGAAGAGTATCCTACCTATGCCAATGGTCCAGGTTACATAGTCTCAGCTGACATTGCTCAGTTCATTGTATCTGAATTTGAGAAGCGCAGATTAAAATTATTTAAAATGGAGGACGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACAGCTCAAGAGCAGTAGAGTATGTGCACAGCTTGAAGTTCTGCCAATTTGGTTGCATCGAAGATTACTACACTGCACATTACCAATCCCCGCGACAAATGACGTGCATGTGGAATAAATTGCAACATCAAGGAAAACCACTCTGCTGCAACATGAGATGA 1938 0.4639 MKRGKLDPFVLPNRFTLLQIFMVVILLYLLFMSFEIPLAFRAGFGSENGAFGFLTDALPVPMPVLIEEPQEKLEIREPKGKKLKKVSTLSFNGSFSEDSELHKVARHAWLAGKKLWGEVESGKVESFAKVNVENGSNSCPSSVTVSGLEFRERFKGVMVLPCGLTLWSHVTVVGTPRWAHAERDPKIAVVKDGDEAVLVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGKPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGHVKCEKWIRDDDNRSEEWKATWWLNRLIGRKKVVTVDWPYPFVEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPMSHPSFAPQMHLELLPQWKAPPLPDVNVELFIGILSAGNHFAERMALRKSWMQHNLIRSSHVVARFFVALHARKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGTRTVAAKYIMKCDDDTFVRVDSVMSEARQVQSDRSLYMGNMNYHHRPFRHGKWAVTYEEWVEEEYPTYANGPGYIVSADIAQFIVSEFEKRRLKLFKMEDVSMGMWVEQFNSSRAVEYVHSLKFCQFGCIEDYYTAHYQSPRQMTCMWNKLQHQGKPLCCNMR* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1557 645 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 156 366 IPR001079 GO:0030246
Apr7g1557 645 Pfam Galactoside-binding lectin 157 364 IPR001079 GO:0030246
Apr7g1557 645 SMART Gal_bind_lectin_2 160 365 IPR001079 GO:0030246
Apr7g1557 645 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 9 645 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr7g1557 645 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 9 645 - -
Apr7g1557 645 Pfam Galactosyltransferase 412 593 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr7g1557 645 Gene3D - 395 639 - -
Apr7g1557 645 Gene3D - 191 364 - -
Apr7g1557 645 CDD GLECT 160 364 IPR001079 GO:0030246
Apr7g1557 645 SUPERFAMILY Concanavalin A-like lectins/glucanases 158 364 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1557 Apr-Chr7 22663635 22668162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1557 18 645 Glycosyltransferase AT1G74800 61.061 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1557 K20843 - gmx:100803219 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1557 7 22663635 22668162 Apr7g1557 7 22663635 22668162 ECH
Apr7g1557 7 22663635 22668162 Apr7g1557 7 22663635 22668162 PCT