Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1551 ATGGAGTTTTTCACCAAAACGATGGTCGTCAAGCTGCATAGCCACCTCGACAAGTTCCTCGTCGCCGACGACGATGCCGGGAAGGTCCGGCAAAGCAGAAAGGGTTCCGGCAGAAGAGCGAAGTGGACGGTGGAGACTGTAGAGGGAGCGAACAAGGTGAGGCTCAAGAGCTGCCACGGGAAGTACTTAACGGCGGCGGAAACGCCGTTTCTGTTGGGGATGACGGGGAAAACGGTGGTACAAACGGAGTACGAAGCGGCGTCGTATTGGAGGTACGAGTGGGAAGTGATACGCGACGGGTTTCAGGTGAAGTTGAGGAGTTGGAGTGGGAAGTACTTGAGGGGGAACGGAGGAACGCCACCGTGGAGGAACTCGGTGACGCACGATGATCCTCATAGTTCGGCGACGCAAAATTGGGTTCTCTGGGATGTGGAAGCTGTTGAGGATGAGGATGATCATGAGTTCTCTGGGATCAGTGTCGTTTCGTCTTTTGCTTCTGATGATCTCTCCAACGGTTCTGATCCCGCGTCGCCTATGTCCGTTTTCTCGCTCAGGTCGCCGCCGGGGAGACTCAACTCCAAGCTGCAAATACAGACAATAAGTTCGAACAAGTTCAGGACGGGCATGGACTTCTTCTACCGCGCCAAGGCGGTGCGGCTCCGGAGCCACCATGAAAAGTACCTTCTAGCGGAGGAGGACGAGGAATCGGTTACCCAAGACAGACACGGGTCCTCTAAAAGCGCACGGTGGTATGTGGAGTACGTACCCGAATACGACAACATAATTCGCCTGAAAAGCTGTTACGGCAAGTACCTAACCGCTTCGAACCACCTATTCTTGCTGGGCATGACGGGTCACAAGGTGCTCCAGACCCAACCTCCGAGGCTCGACTCATCGGTTGAGTGGGAACCCATCAAGGACGGTGGGCGCGTGAAGCTCAAGACCCGTTACGGAAACTTCCTCAGAGCCAATGGGGGTTTGCCACCTTGGAGGAACTCCGTTACGCATGATATTCCGCACAGGACCGTTACGCAGGATTGGATCTTGTGGGATGTTGATGTTGTCGAGATTCATGTCAATTCCCCTGTTCAAAGACCTTCTGCTCCACCCTTGCCTCTTCCGGATTCTGTTCATGACCACACCAACGCGCCTTCACCACTCACTGTGTCTGCTAGCTTTTCAAGCCAACAGTCGAATGATCGGAATGGTTGGTCGCCGAAGGTGGAGGGGAGAACTATATACTATCACATTGCTGAGGACAATGGAGAGGTTTTGGATGCAGATATGCAGGGGTATTCTTTGAATTTTAAAGGGAATGGAGTTGAAGAACTGACTCGAAAGTTTGAGGAAGAGACAGGGCTAGAGGGAGTCATTGTGTGCAATCGGAGTCCTTTGAATGGAATGCTTTATCCTCTGCGCTTGCAGCTTCCTCCAAACAATGTCACCATGCAGGTTGTTTTGGTTCTGCCCATGTCAAAAGTGGCAAGAGACTTTGAGGCACAAGGTTTACTGTGA 1515 0.5261 MEFFTKTMVVKLHSHLDKFLVADDDAGKVRQSRKGSGRRAKWTVETVEGANKVRLKSCHGKYLTAAETPFLLGMTGKTVVQTEYEAASYWRYEWEVIRDGFQVKLRSWSGKYLRGNGGTPPWRNSVTHDDPHSSATQNWVLWDVEAVEDEDDHEFSGISVVSSFASDDLSNGSDPASPMSVFSLRSPPGRLNSKLQIQTISSNKFRTGMDFFYRAKAVRLRSHHEKYLLAEEDEESVTQDRHGSSKSARWYVEYVPEYDNIIRLKSCYGKYLTASNHLFLLGMTGHKVLQTQPPRLDSSVEWEPIKDGGRVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTVTQDWILWDVDVVEIHVNSPVQRPSAPPLPLPDSVHDHTNAPSPLTVSASFSSQQSNDRNGWSPKVEGRTIYYHIAEDNGEVLDADMQGYSLNFKGNGVEELTRKFEEETGLEGVIVCNRSPLNGMLYPLRLQLPPNNVTMQVVLVLPMSKVARDFEAQGLL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1551 504 MobiDBLite consensus disorder prediction 381 405 - -
Apr7g1551 504 Gene3D - 217 335 - -
Apr7g1551 504 MobiDBLite consensus disorder prediction 363 405 - -
Apr7g1551 504 Gene3D - 5 145 - -
Apr7g1551 504 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 188 - -
Apr7g1551 504 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 202 493 - -
Apr7g1551 504 Pfam Domain of unknown function (DUF569) 1 142 IPR007679 -
Apr7g1551 504 Pfam Domain of unknown function (DUF569) 209 350 IPR007679 -
Apr7g1551 504 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 202 493 - -
Apr7g1551 504 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 188 - -
Apr7g1551 504 SUPERFAMILY Actin-crosslinking proteins 213 355 IPR008999 -
Apr7g1551 504 SUPERFAMILY Actin-crosslinking proteins 6 145 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1551 Apr-Chr7 22621040 22627688 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1551 - - gmx:100797561 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1551 7 22621040 22627688 Apr7g1551 7 22621040 22627688 ECH
Apr7g1551 7 22621040 22627688 Apr7g1551 7 22621040 22627688 PCT