Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1479 ATGAGATGCTCTCACGCCAACAACGCTCTCTTCAACGCTTTGAAACCCAAACCCCACAATTCAAAGAACCTTCTCATTCCCACTTCATTTGGACTCTCTTCAACGCTCATCAACGAAGCTGGTAAGAAGAAGAACGCATACGATGCATTGCTATTGGATGCTGGAGGCACTCTTTTGCAATTGGCCAAGCCAGTTGAGCACACTTACGCCGATATTGCAACCAAATACGGTTTGAATTTGAATCCAGTTGAGATAAAGCAAGGATTTAAGAGAGCATTTGCTGCACCCTGGCCCCATAACTTACGTTACAAGGGAGATGGGAGGCCATTTTGGAGACTTGTAGTTTCTGAAGCCACTGGTTGTAGAGATGAAGATTATTTTGAGGAAGTTTATGAGTACTATGCAAAAGGTGATGCATGGCATCTTCCAGACGGAGCTTATGAAACAATAACTCTTCTCAAAGACGCAGGAGTTAAAATGGCTGTTGTATCCAATTTTGACTCCCGCTTAAGGAAGCTATTGAAGGATCTCAATGTTTTAAATCTGTTTGATGCTGTCATTGTATCATCAGAGGTTGGATATGAAAAACCAGACCCAAGAATATTTCAAGCTGCTCTAGATCAGGTAAATGTAGAGGCTTGCAAAGCCTTACACATTGGAGACGATCAAAAGGCAGATAAACTGGGGGCCAATGCTGTGGGTATAGATTGCTGCAGGTTGTGGGGGATTGATGTGAAGACATTTTATGATATACAAATCCGCTTCCTCAATTAA 774 0.4238 MRCSHANNALFNALKPKPHNSKNLLIPTSFGLSSTLINEAGKKKNAYDALLLDAGGTLLQLAKPVEHTYADIATKYGLNLNPVEIKQGFKRAFAAPWPHNLRYKGDGRPFWRLVVSEATGCRDEDYFEEVYEYYAKGDAWHLPDGAYETITLLKDAGVKMAVVSNFDSRLRKLLKDLNVLNLFDAVIVSSEVGYEKPDPRIFQAALDQVNVEACKALHIGDDQKADKLGANAVGIDCCRLWGIDVKTFYDIQIRFLN* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1479 257 CDD HAD_dREG-2_like 146 237 - -
Apr7g1479 257 Gene3D - 51 236 IPR023214 -
Apr7g1479 257 SFLD Haloacid Dehalogenase 47 239 - -
Apr7g1479 257 Gene3D - 63 135 IPR044924 -
Apr7g1479 257 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 47 239 - -
Apr7g1479 257 PANTHER F14L17.7 PROTEIN 1 256 - -
Apr7g1479 257 Pfam Haloacid dehalogenase-like hydrolase 122 238 IPR041492 -
Apr7g1479 257 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 47 58 IPR006439 -
Apr7g1479 257 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 153 166 IPR006439 -
Apr7g1479 257 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 183 199 IPR006439 -
Apr7g1479 257 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 201 221 IPR006439 -
Apr7g1479 257 PANTHER - 1 256 - -
Apr7g1479 257 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 50 236 IPR011949 -
Apr7g1479 257 SUPERFAMILY HAD-like 47 240 IPR036412 -
Apr7g1479 257 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 150 234 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1479 Apr-Chr7 21861224 21865004 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1479 - - gmx:100306694 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1479 7 21861224 21865004 Apr7g1479 7 21861224 21865004 ECH