Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1450 ATGTCGAGCATTGCCTTAGAGCCACTCTTCCACCTTTGCCGAAGAGAAAATCCAATTCAACCTTCCAAACCAATCCCATTCAGACCCTTCTTTCTCACTTGCTCTTCCTCTAATCTCACTAATGCATCCTTCACCTTCCACCAACCCAGCAAGCCTCTCTCTCATGCACTTCAAGCTTCCGTTACAGACACACCCATCCTTCATTCCCATCATACCTTCTTCACCAAGACTTTCCCAATCAACACAACCCAAATGGTGGAGGGAAAGATTATTGTGAGATTAGATCACGGAAAGGATTTGAGGGATTGGGAGCTTACAGTGGGTTGCAATCTACCTGGGAAATGGATTCTTCACTGGGGTGTCACCTATGTTGATGATGTTGGAAGGGAATGGGATCAACCTCCTCGTGATATGATTCCTCCTGGATCTATTCCTATAAAGGACTATGCTATAGAGACCCCTTTGAAGAAGTCATGCTTACCTGCTGAAGATACGATTCATGAAGTCAGGATTGATCTTAAACACATCAATGAAATTTCAGCAATTAATTTTGTTCTCAAGGATGAGGAAACTGGAGTTTGGTATAAACACAAAGGAAGAGATTTCAAGGTTTCTTTGGTCAACTGCGTTATGGCGGATACTAATACAATTGGACCTAAAGGGGGCTTAAGATTATGGCCAGGGAATTTGGGGCAAATATCTAAAATGTTCATCAAGCCAAAAGCAGGTCTAGATAACAGGAGTGAATCCAGAGATCCAAAACAAGAAAATAATAAAGTAGGTGGTTTCTATGAAGAAGTGACTATCACAAAGAAAGTTTTAATCAATAACTCTATCAGTGTCTCCATCAAGAAACGTTTTGAGTCAGAGGCAGTTAAGGATCTTTTATATTTTGAAACTGATCTACCTGGAGATGTTGTCCTTCATTGGGGAGTTTGCAGGGATGGTTCAAGAAGGTGGGAAATTCCACCTCCTCCTCATCCACCAGGCACAATGGCATTTAAAGACAAGGCTTTGAGAACTCAATTAAGGCCAAGAGACAGTGGAAAAGGATCATCAGCACTAATCACTTTAGGAGAAGAATTTTCAGGATTTAGTTTTGTTCTTAAGCAAAATGAAAATACTTGGTTCAAGAACATGGGAAATGACTTTTATATTCCCCTCTCAAGTTCTACTAGCTTGCTTAATTTTGGCTACAGAGAGGATCAACTAGAAGGTGTGCAGAGGGAAGTGATTGAAGAGGCTAGTCAAGATACTTCTTTCTTTGCATTTACTGATGGGATATTCAATGAAATAAGAAATATGGTCACAGAAAATTCATCAGAGAAGAGTCAAAAGACAAAATCTGAAAAAGCACAACAAAGCATTTTTCAAGAAATTGAAAGACTGGCTGCTGAAGCCTATAATATATTCAGAAGCTCCATTCGTATTTTCTCTGAGGCATCAACTGTAGAATCTGAGGTAACTCTTAAGGAAATTGAGGCAACTATTGTGGAACCTCAGGCAACAACAATTGCGGTACCTGAGGCTGCTGTGGAATCAGAGACTCAGACCTTGGATCCAAAAATATGCTCAGCGACAGGCACAGGGTATGAAATATTATGTCAAGGGTTTAACTGGGAATCTCATAAATCCGGAAGATGGTACATGGAGCTTAAAGAGAAAGCTTCAGAACTATCATCACTTGGTTTCACTGTGGTTTGGTTACCACCACCTACAGAGTCTGTTTCACCTGAAGGATACATGCCAAAGGATTTATATAATTTAAATTCCAGATATGGAAGCATTGATGAACTGAAAGATTTGGTGAAAAGATTTCATGAAGTTGGGATCAAAGTTCTAGGAGATGCTGTTTTAAATCACCGCTGTGCTCATTATCAGAATCAAAATGGTATTTGGAACAAATTTGGAGGCAGTCTCAACTGGGATGATCGTGCTGTTGTTGCTGATGATCCACATTTTCAGGGTAGGGGCAACAAGAGTACTGGAGATAATTTTCATGCTGCTCCAAACATTGATCATTCACAGGAATTTGTGAGAAAGGATCTCCAAGAATGGTTATGCTGGTTGAGGAAAGAAATTGGGTATGATGGATGGAGACTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACGTGGAAGCGAGTGAGCCTTACTTTGCTGTGGGAGAGTTTTGGGACTCCCTCAGTTACACAGATGGTGAAATGGATCATAATCAAGATGCTCATAGGCAAAGGATAGTTGACTGGATCAGTGCCACCAATGGTACTGCTGGTGCATTTGATGTTACAACTAAAGGGATTCTTCACTCTGCATTGGAAAGATGTGAATATTGGCGATTGTTAGATCCGGCGGGAAAACCTCCTGGCATTGTTGGGTGGTGGCCATCTCGTGCTATTACCTTTGTAGAGAATCATGACACTGGTTCCACACAGGGTCATTGGAGATTTCCCTGTGGAAAAGAAATGCAAGGATATGCTTACATTCTTACTCACCCAGGAACCCCATCAGTTTTCTTGGACCACATTTTATCTCACCATAAAAATGACATAGCAACTCTTATGACTCTCAGGAAGAGGAACAAAATCCACTGCAGGAGTACAGTTCAAATTACTAAAGCAGAGAGGGATGTTTATGGAGCCATCATTGATGAAAAAGTTGCTATGAAGATCGGACCTGGATATTTTGAACCCCCTAGTGGCTCCCGCAAATGGTCATTAGCTATTGAGGGAAACGACTATATGATTTGGGAAGCATCATAA 2772 0.4098 MSSIALEPLFHLCRRENPIQPSKPIPFRPFFLTCSSSNLTNASFTFHQPSKPLSHALQASVTDTPILHSHHTFFTKTFPINTTQMVEGKIIVRLDHGKDLRDWELTVGCNLPGKWILHWGVTYVDDVGREWDQPPRDMIPPGSIPIKDYAIETPLKKSCLPAEDTIHEVRIDLKHINEISAINFVLKDEETGVWYKHKGRDFKVSLVNCVMADTNTIGPKGGLRLWPGNLGQISKMFIKPKAGLDNRSESRDPKQENNKVGGFYEEVTITKKVLINNSISVSIKKRFESEAVKDLLYFETDLPGDVVLHWGVCRDGSRRWEIPPPPHPPGTMAFKDKALRTQLRPRDSGKGSSALITLGEEFSGFSFVLKQNENTWFKNMGNDFYIPLSSSTSLLNFGYREDQLEGVQREVIEEASQDTSFFAFTDGIFNEIRNMVTENSSEKSQKTKSEKAQQSIFQEIERLAAEAYNIFRSSIRIFSEASTVESEVTLKEIEATIVEPQATTIAVPEAAVESETQTLDPKICSATGTGYEILCQGFNWESHKSGRWYMELKEKASELSSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGSIDELKDLVKRFHEVGIKVLGDAVLNHRCAHYQNQNGIWNKFGGSLNWDDRAVVADDPHFQGRGNKSTGDNFHAAPNIDHSQEFVRKDLQEWLCWLRKEIGYDGWRLDFVRGFWGGYVKDYVEASEPYFAVGEFWDSLSYTDGEMDHNQDAHRQRIVDWISATNGTAGAFDVTTKGILHSALERCEYWRLLDPAGKPPGIVGWWPSRAITFVENHDTGSTQGHWRFPCGKEMQGYAYILTHPGTPSVFLDHILSHHKNDIATLMTLRKRNKIHCRSTVQITKAERDVYGAIIDEKVAMKIGPGYFEPPSGSRKWSLAIEGNDYMIWEAS* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1450 923 SUPERFAMILY Glycosyl hydrolase domain 866 921 - -
Apr7g1450 923 SMART alpha-amyl_c2 862 922 IPR012850 GO:0004556|GO:0005509|GO:0005975
Apr7g1450 923 PANTHER ALPHA-AMYLASE 76 923 - -
Apr7g1450 923 Gene3D - 866 922 IPR013780 -
Apr7g1450 923 Pfam Alpha-amylase C-terminal beta-sheet domain 863 921 IPR012850 GO:0004556|GO:0005509|GO:0005975
Apr7g1450 923 Gene3D Glycosidases 532 865 - -
Apr7g1450 923 SMART aamy 532 867 IPR006047 GO:0005975
Apr7g1450 923 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 76 923 - -
Apr7g1450 923 CDD AmyAc_arch_bac_plant_AmyA 533 872 - -
Apr7g1450 923 SUPERFAMILY (Trans)glycosidases 530 851 IPR017853 -
Apr7g1450 923 PRINTS Alpha-amylase signature 610 621 IPR006046 GO:0004556|GO:0005975|GO:0043169
Apr7g1450 923 PRINTS Alpha-amylase signature 696 707 IPR006046 GO:0004556|GO:0005975|GO:0043169
Apr7g1450 923 PRINTS Alpha-amylase signature 800 812 IPR006046 GO:0004556|GO:0005975|GO:0043169
Apr7g1450 923 Pfam Alpha amylase, catalytic domain 559 733 IPR006047 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1450 Apr-Chr7 21621695 21628533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1450 1 923 Glycoside Hydrolase AT1G69830 59.422 0.0 1116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1450 K01176 - gmx:100810333 1488.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1450 7 21621695 21628533 Apr7g1450 7 21621695 21628533 ECH