Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1441 ATGGAAAAAGACGAAGAATGGAAAAAAGCAGAGAACAAAGATGAATCACAACAACGACTATGGAGTTGGGGTGCTGGAACTGAGGGACAGTTAGGAACAAACAAGCTTCAAGACGAGCACTGCCCTCAACTCCTTCACCAACCCTCTCTCTCTTCCATCTCTTCCCTTGCTTGTGGCGGCGCTCATGTCTTAGCCTTGACCTCCGCTGGGAAGGTACTATCATGGGGTAGAGGCAATTCTGGTCAACTAGGCCATGGGGAGGTTTGTAATAACGCTTTGTATCCCAAGTTTATGACATCATTGGATGGCTACTTCATAACCCATGTCTCTGCTGGTTGGAGCCACTCAGGTTTTGTTTCAGATTCTGGGTCTGTGTTCACTTGTGGGGATGGTTCGTTTGGTCAACTTGGGCATGGAGATTATGCCTCGCACTGCTCTCCTGTCAAAGTGTCATGCTTTATTAATCAGCACGTTGAACAAATAGCATGTGGCATGCGCCATTCCCTTGTCTTGTTAAAAGTAAACAAAGTTTATGGATTTGGCTCTGGGAAGCGTGGTCAATTGGGTGTCTCCAAAGATAGGATCAAATCTGTTAATGTTCCTAAAGTTGTTAGTGGCTTTACAGATGTGAAAATTGTTGAGATTGCTGCAAATGGAGATCATAGTGCTGCAGTGTCTGTTGATGGGCATATTTACACATGGGGAAGAGGCTTCAAGGGCTTTGAAGATGATCACATTCCTCACTGCTTAAACTCTACATTGAATTTTACTAAAGTTGCTGTAGGATGGAACCACGCTTTAACTATGACCGGTGAGGGGGAGGTTTATATGCTTGGCGGGAACCATCTTGGAGTGCTTAGCGATCTTCAGAATACGAGCCCAGCTAAGCAGTTATCTGATTCAAAAGAAGCAAATTTGGAGAAAGTCCCTGACCTCGATGGCATGAAGATTGCTGATATTGCTACCGGAGCTGAGCATTCAGTCCTTGTCACAGAGAATGGAGAAATAAAGACATGGGGTTGGGGTGAGCACGGTCAACTTGGCGTAGGGGATACTTCCGACCAAATTACTCCTGTTAATGTAAGACTTGGGAATGATATGAATGAAACTGCATCAATCAGAGTTTTCTGTGGCAGTGGATTCACATTTGCTGTAACCATGCCCTAG 1167 0.4499 MEKDEEWKKAENKDESQQRLWSWGAGTEGQLGTNKLQDEHCPQLLHQPSLSSISSLACGGAHVLALTSAGKVLSWGRGNSGQLGHGEVCNNALYPKFMTSLDGYFITHVSAGWSHSGFVSDSGSVFTCGDGSFGQLGHGDYASHCSPVKVSCFINQHVEQIACGMRHSLVLLKVNKVYGFGSGKRGQLGVSKDRIKSVNVPKVVSGFTDVKIVEIAANGDHSAAVSVDGHIYTWGRGFKGFEDDHIPHCLNSTLNFTKVAVGWNHALTMTGEGEVYMLGGNHLGVLSDLQNTSPAKQLSDSKEANLEKVPDLDGMKIADIATGAEHSVLVTENGEIKTWGWGEHGQLGVGDTSDQITPVNVRLGNDMNETASIRVFCGSGFTFAVTMP* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1441 388 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 175 228 IPR000408 -
Apr7g1441 388 SUPERFAMILY RCC1/BLIP-II 17 286 IPR009091 -
Apr7g1441 388 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 70 122 IPR000408 -
Apr7g1441 388 PRINTS Chromosome condensation regulator RCC1 signature 19 35 IPR000408 -
Apr7g1441 388 PRINTS Chromosome condensation regulator RCC1 signature 53 66 IPR000408 -
Apr7g1441 388 PRINTS Chromosome condensation regulator RCC1 signature 72 88 IPR000408 -
Apr7g1441 388 PRINTS Chromosome condensation regulator RCC1 signature 161 177 IPR000408 -
Apr7g1441 388 PRINTS Chromosome condensation regulator RCC1 signature 177 191 IPR000408 -
Apr7g1441 388 PRINTS Chromosome condensation regulator RCC1 signature 329 350 IPR000408 -
Apr7g1441 388 MobiDBLite consensus disorder prediction 1 16 - -
Apr7g1441 388 PANTHER OS01G0777800 PROTEIN 20 383 - -
Apr7g1441 388 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 20 383 - -
Apr7g1441 388 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 334 388 IPR000408 -
Apr7g1441 388 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 229 272 IPR000408 -
Apr7g1441 388 MobiDBLite consensus disorder prediction 1 21 - -
Apr7g1441 388 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 320 330 IPR000408 -
Apr7g1441 388 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 123 174 IPR000408 -
Apr7g1441 388 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 273 333 IPR000408 -
Apr7g1441 388 Gene3D - 299 387 IPR009091 -
Apr7g1441 388 Gene3D - 91 298 IPR009091 -
Apr7g1441 388 Gene3D - 9 90 IPR009091 -
Apr7g1441 388 Pfam Regulator of chromosome condensation (RCC1) repeat 70 118 IPR000408 -
Apr7g1441 388 Pfam Regulator of chromosome condensation (RCC1) repeat 334 385 IPR000408 -
Apr7g1441 388 Pfam Regulator of chromosome condensation (RCC1) repeat 122 171 IPR000408 -
Apr7g1441 388 Pfam Regulator of chromosome condensation (RCC1) repeat 176 225 IPR000408 -
Apr7g1441 388 Pfam Regulator of chromosome condensation (RCC1) repeat 19 66 IPR000408 -
Apr7g1441 388 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 161 171 IPR000408 -
Apr7g1441 388 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 18 69 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1441 Apr-Chr7 21525482 21528531 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1441 - - gmx:100793672 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1441 7 21525482 21528531 Apr7g1441 7 21525482 21528531 ECH