Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1440 ATGCATTTTCTCACTGCACCTTCTCTTTCCCTGTTCTCCCCTCATTTGATCCCTTCTCTCTTCCCCTCCTTCGGCCCCAACGGGAGGGTGCGCCGGTTCGCGCTTCTCAACGATCCCGGTTCGGTTTTTGTGTGCGTGGATTCTTTTAAGAAGGGGAATTGCTATTGGTCTTGCTCTCGGTTCTTGAGGCGGTGCAAGGATTCGGAGGGAGAGTTGTCCTCTCTGGAGTCGCAGATTTTGGAGTTCATGCAGAATTCCGATAAGCCTGAAGCGTTTCCCACGAAGGAAGAGTTGGTTGCTGCTGGGAGGGTGGATTTGGTTCACGCCATTGCTGACGAAGGAGGATGGCTTGCGTTTGGGTGGGATTTGAATGATGGGTCCAGTGAAATTCACGATTTTGAAGATAAGGGTGGCAAGGAAATTGATGGTAATGAAACTCGGGCTTCTGGGGTTTCTTCTTCTCCTTCTCAACCAGCTAAATCACTGGAAATAGAAGCTGAGGAATCTGGTATTGAGGGTATATTGAATCGGCTGGAGAAACAAAGAAATAGTTCTTTTGGACTTGGCTTGAGAGAGAAAGAAGGTAATGTTTCTTTCGAAAATAATGAAGATAAAGATGAATGGGATCACAGAGCCACAGCAGATGCAGTAGCTGCTCACCTTGACAATAGTAGCAGCTCATTGAGTCCTACAAGCAATCATCTCAGTGGTTCCCAGATCAAACATGATTTGCACAGTTCTCATTTAGGTACTGACAATTTAAGAAACTCACTTAAGCCAGAGATGTGGAGGAATTGGATTATTCAGAGAAATGGTTCTTCAGATGCTGATTTTGAAGACGCTGAAATTGTTCCTGGTGAAACTCAGAAAGGAGGTGTAACTGACGTTTCAGGACGATCTGATATCCTCAATGGGAGAGAGTTTTCTTGTGAAACTATAAACAAAGAAACTGGATTATATTCTGTTGATGGAAATGCAAATCACAATGACATAAAATCCCGTATCCAATATCTGGAGTCAGAGCTATCTTCTGTACTTAACTCGTTGAGGTCTAGTTCAGATATAGTTAAAATGCAGACGGGCCAGGAGAGCTCTTCTGATGATCTGGCAAAGCTTTCAGATGCCTGGGAATTCCAAGAAAATGAGATCATGAATGCTCAGGACAGACTGCGTTCTATACGGGCTAAGTTGGCAGTGTTAGAAGGAAAGATGGCATTGGCAATAATGGATGCACACAAGGTAGTCCAAGAAAAGCAGAAGAAGATTAATAATGCTCAAAAAGCTTTGCAAATTCTGAAGACTACTTCTGTAGTTTGGCCTAGTAATGCTTCAGAAGTACTTTTAACTGGATCATTTGATGGTTGGTCCACAAAGAGAAAGATGGAGAAGTCAAGTACTGGAATATTTTCTGTGTGCTTGCAGCTGTATCCTGGAAAGTATGAGATCAAGTTCATTGTAGACGGAGAATGGAAAATTGATCCATTACGCCCAGTAGTGCACAACAATGGCTATGATAATAATCTTCTCATTATTCATGATTGA 1542 0.4293 MHFLTAPSLSLFSPHLIPSLFPSFGPNGRVRRFALLNDPGSVFVCVDSFKKGNCYWSCSRFLRRCKDSEGELSSLESQILEFMQNSDKPEAFPTKEELVAAGRVDLVHAIADEGGWLAFGWDLNDGSSEIHDFEDKGGKEIDGNETRASGVSSSPSQPAKSLEIEAEESGIEGILNRLEKQRNSSFGLGLREKEGNVSFENNEDKDEWDHRATADAVAAHLDNSSSSLSPTSNHLSGSQIKHDLHSSHLGTDNLRNSLKPEMWRNWIIQRNGSSDADFEDAEIVPGETQKGGVTDVSGRSDILNGREFSCETINKETGLYSVDGNANHNDIKSRIQYLESELSSVLNSLRSSSDIVKMQTGQESSSDDLAKLSDAWEFQENEIMNAQDRLRSIRAKLAVLEGKMALAIMDAHKVVQEKQKKINNAQKALQILKTTSVVWPSNASEVLLTGSFDGWSTKRKMEKSSTGIFSVCLQLYPGKYEIKFIVDGEWKIDPLRPVVHNNGYDNNLLIIHD* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1440 513 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 46 512 - -
Apr7g1440 513 Pfam Glycogen recognition site of AMP-activated protein kinase 435 512 IPR032640 -
Apr7g1440 513 MobiDBLite consensus disorder prediction 134 162 - -
Apr7g1440 513 Coils Coil 369 403 - -
Apr7g1440 513 Gene3D Immunoglobulins 431 512 IPR013783 -
Apr7g1440 513 CDD E_set_AMPKbeta_like_N 434 511 - -
Apr7g1440 513 Coils Coil 408 435 - -
Apr7g1440 513 MobiDBLite consensus disorder prediction 146 160 - -
Apr7g1440 513 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 46 512 - -
Apr7g1440 513 SUPERFAMILY E set domains 434 512 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1440 Apr-Chr7 21519985 21525518 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1440 - - gmx:100814629 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1440 7 21519985 21525518 Apr7g1440 7 21519985 21525518 ECH