Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr7g1228 | ATGTCAATAAATGTGTGTTCAGAGAAAGCAGGCTTTGGAATCAGCCCTCGCATTTCATTCTCGCAAGACCCCAAAAACACAATCTCAGTTGAAAGCCCTCGTAAGCAAGACACGTGCATATTAGACTCGAGCTCAGACTTCGTTTTCTGCATCACAAACGGCGTCCCACACAAACTCTCTTCAGCGGACGAGCTTTTCTCCAACGGCAAAATCGTTCCCAAGCAAATCACCAGAATTTCCAAAGCCCCACCACACCAGCCCCATCATCAACCCCATTTCAACACGCAAAAGAAGAGGCTCAAAGAGTTCTTGTCAGAGCCAGATGATGACGACACCCAAGAACATGATAAGCCCAATTCTTCTTCCAAACATTTCTGGCGTAGCAGCAGTTTGAACTGTGATGGGGCCACACGTGGGAAACGCTTGCTTCGTTCTTCCTTGCAGTTTCTGTCACGAAGCTATTCAACTGGCTCGGCACCGAACACGCCAAAACATGGCCTTATTCGAAGGGGAAATGCAGAGAGGCATAGGCTGCAGAAACAGTCCTCTGCTTCATCGTTGTCATTGTCTTTGTCATCATCGTCTTCAGCAAGTTCAAGTGCATATTATTTCTATGATTCCGCTCAAAAGCCTTCTTTAAAGAAAAATTGTGGCTCTTCTGCTGGTAATGCTGTTCGCATTAGTCCTGTTTTGAATCTTCCCCGTCGCAAAGCTTCTAAGAGCTTCTTCGGATTTGGTTCACTATTCTGTAATGGGAAGATTAAAAGCAAAAAATAA | 777 | 0.453 | MSINVCSEKAGFGISPRISFSQDPKNTISVESPRKQDTCILDSSSDFVFCITNGVPHKLSSADELFSNGKIVPKQITRISKAPPHQPHHQPHFNTQKKRLKEFLSEPDDDDTQEHDKPNSSSKHFWRSSSLNCDGATRGKRLLRSSLQFLSRSYSTGSAPNTPKHGLIRRGNAERHRLQKQSSASSLSLSLSSSSSASSSAYYFYDSAQKPSLKKNCGSSAGNAVRISPVLNLPRRKASKSFFGFGSLFCNGKIKSKK* | 259 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr7g1228 | 258 | PANTHER | OS06G0675200 PROTEIN | 1 | 258 | - | - | |
| Apr7g1228 | 258 | MobiDBLite | consensus disorder prediction | 106 | 128 | - | - | |
| Apr7g1228 | 258 | PANTHER | COPPER-BINDING PERIPLASMIC PROTEIN | 1 | 258 | - | - | |
| Apr7g1228 | 258 | Pfam | Protein of unknown function (DUF1645) | 62 | 200 | IPR012442 | - | |
| Apr7g1228 | 258 | MobiDBLite | consensus disorder prediction | 106 | 122 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr7g1228 | Apr-Chr7 | 19384844 | 19385620 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr7g1228 | - | - | pvu:PHAVU_003G044800g | 321.242 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Apr7g1228 | 7 | 19384844 | 19385620 | Apr7g1228 | 7 | 19384844 | 19385620 | ECH | |
| Apr7g1228 | 7 | 19384844 | 19385620 | Apr6g1053 | 6 | 15224011 | 15224770 | ECH | |
| Apr7g1228 | 7 | 19384844 | 19385620 | Apr2g1463 | 2 | 20679278 | 20680065 | ECH | |
| Apr7g1228 | 7 | 19384844 | 19385620 | Apr4g2745 | 4 | 35974073 | 35975269 | ECH | |
| Apr7g1228 | 7 | 19384844 | 19385620 | Apr6g0397 | 6 | 4544346 | 4545935 | ECH |