Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1168 ATGGCATCAGGTGAAGGTGATACAAGTGAAATGATGGAAACTCATGCAGAAGATTCTTCTATACCCGAGGAACAGTTGCCTGATGTGAGTCATCATTACAAAGATGAAAACAATGGAAATATTATATTGGAAAACGGTTTGTCTGATGGCAATCAAGGTCCAGATGACGCTCACGATCAGCTTCTACAAATGGTTGTGGACCTCAGATTTCAGAATGAATTCTTGAAGTCACAATTTGAGGGATTTAGCAATATAAACACTGTACATAGTGACTCTAATATGCAGAAAGGAGTTGGTAACCTGGAAGATCGGGAATCTGACATTGTGAAAGAGCCACAGGAAAGGATACAATCGTTAAATAAAGAATTTCTGGAAGAAAAACAAACAAGAATTGCATCTGAAGAGGCTTTGAAGCACCTTCAAATAGCATATTCAGAGGCTGAAGCCAAGGCCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACGAAGTTGGACCAAGAAATTAAAGAGCGTGAAGAGAAGTACTCTGAACTTGACTCAAAGTTTAATAGGCTTCACAAACGAGCAAAACAGCGCATTCAAGAAATTCAAAAGGAAAAAGATGATATTGAGGCCCGCTTATCTGAGGTGAATGAAACTGCAGAGAGAGCATCATCCCAACAGTCAGCATTGCAACAAGAGTTAGAGCGCACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGGTGATAGGCAACAATTAAGAAGTGCAAACAACAAACTTCGAGATACCATTGAGGATTTAAGGCGGTCATTGGAACCAAAAGAGATTGCTCTTGAGGCATTGCAACAGTCACTTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGTTTGCTTCAGGCTGCTGACGAAAAAAGGCAAGCTGCACTAGCTGAGCTCTCAGCTAAACATCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGATGCATTGTCCGATAGAAGTAAGGCAGCTGAATCCATTTCTTCATTGCAGGTTCTAGTTGCAGAAAAAGAATCTAGAATTGCAGAGATGGAAGCAGCATCATCTGGGGAAGCAGCACGACTCAGAGCATCTGTGGAGAGTGTAAAGGGGGAGCTTTCTCACCTAAAACAGGAGCATGAGAAAGAGAGGGAAAGCTGGGAGACTGCATCTCAAGCCCTTAAAGCAAAACTTGAAACTGCAGAGAGCAACTGTATTCGTTCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTAGAATCAGAGGTATCTGCACAAACAAGGCTCCTTAACATGAGAGATACTGAATTGTTGGCTTCCAAGGAAGAGATCAGCTCTCTTGAGAGGGAATTTTCTTCGTACAAGGTTCGTGCACATGCACTTCTTCAAAAGAAGGATGCTGAACTGGCTGCTGCTAAAGATTCTGAACAACTCAAAGCTCTTGAGGAAACTCTAAAAGAGGTTGAAAATGAAGTATTATCTATAACAGAAGAAAGGGATAGAGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAAGAACTAGCAGAAAGAGACACAGACCTTGAAAATGTCAAGCAACAACTAAGGAGCTTAGAAATAAAGCTTGACTCAGCTAATGCTCAGCACCTAAAAGAGAAAGAGGATTGGGGACTAAGCCTTAAAAATGTGGAAGAAACATGGAGAATCAGATGTGAGGCAATGAAGGCTGAAAATGAAGCAACTGCTACAAAAGATAGGCAAAAGGAACTGGAAGAACTCAAACAGCGATGTAAAAAATTGAAGGAAGAGCATGCTTCATTTCATGATCTTGCTGATAGGATGATTGAGGAGAAAGATAATGAAATATCCAGACTTCTAGATGAAAATAAGAATCTTCGTCAGTCTCTTCAATCAAGACCTCGAGTCGATCAAAATGATAATCATACAACAGCCTTGCATAAATTGGATTCAACAAATTTAAGTCCCTCAGCTGCAGAACAGCAAATTCTGCTTTTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTAGCACAGTCACAGCGCCATATTTTAGCTCTTCAGGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAGCCAACAGGAGACAATGTTAAAGGCTGAGCTTCGCAACATGGAAAGATCAAAGAAAAGGGAAGGTGTAGATATGACATATTTGAAAAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTACTACCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAACAGGCATATCACAACTCAACAGATGTGCCGCCAAGTCCTGCAAGTGATGCTTCAGGATCTGGCCTCTCTCTTTTCTCAAGATTCTCATTTACTTAA 2409 0.4089 MASGEGDTSEMMETHAEDSSIPEEQLPDVSHHYKDENNGNIILENGLSDGNQGPDDAHDQLLQMVVDLRFQNEFLKSQFEGFSNINTVHSDSNMQKGVGNLEDRESDIVKEPQERIQSLNKEFLEEKQTRIASEEALKHLQIAYSEAEAKAQELSEKLAEAQTKLDQEIKEREEKYSELDSKFNRLHKRAKQRIQEIQKEKDDIEARLSEVNETAERASSQQSALQQELERTRKQANEALKAMDGDRQQLRSANNKLRDTIEDLRRSLEPKEIALEALQQSLAEKEQMLEDMRGLLQAADEKRQAALAELSAKHQKNIESLEAQLNDALSDRSKAAESISSLQVLVAEKESRIAEMEAASSGEAARLRASVESVKGELSHLKQEHEKERESWETASQALKAKLETAESNCIRSEVEVAKIRSQLESEVSAQTRLLNMRDTELLASKEEISSLEREFSSYKVRAHALLQKKDAELAAAKDSEQLKALEETLKEVENEVLSITEERDRVLQDLQSAMANHEKELAERDTDLENVKQQLRSLEIKLDSANAQHLKEKEDWGLSLKNVEETWRIRCEAMKAENEATATKDRQKELEELKQRCKKLKEEHASFHDLADRMIEEKDNEISRLLDENKNLRQSLQSRPRVDQNDNHTTALHKLDSTNLSPSAAEQQILLLARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQETMLKAELRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEMQKCQQAYHNSTDVPPSPASDASGSGLSLFSRFSFT* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1168 802 Coils Coil 616 636 - -
Apr7g1168 802 Coils Coil 469 556 - -
Apr7g1168 802 Pfam GRIP domain 730 769 IPR000237 -
Apr7g1168 802 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 48 780 - -
Apr7g1168 802 ProSiteProfiles GRIP domain profile. 726 773 IPR000237 -
Apr7g1168 802 Coils Coil 137 267 - -
Apr7g1168 802 Coils Coil 275 359 - -
Apr7g1168 802 Gene3D - 163 316 - -
Apr7g1168 802 MobiDBLite consensus disorder prediction 772 791 - -
Apr7g1168 802 MobiDBLite consensus disorder prediction 1 56 - -
Apr7g1168 802 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 48 780 - -
Apr7g1168 802 Coils Coil 677 718 - -
Apr7g1168 802 SMART 1grip 729 773 IPR000237 -
Apr7g1168 802 MobiDBLite consensus disorder prediction 10 38 - -
Apr7g1168 802 MobiDBLite consensus disorder prediction 213 230 - -
Apr7g1168 802 Coils Coil 364 409 - -
Apr7g1168 802 Coils Coil 574 611 - -
Apr7g1168 802 MobiDBLite consensus disorder prediction 211 231 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1168 - - gmx:100775990 1287.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1168 7 18577475 18588171 Apr7g1168 7 18577475 18588171 ECH