Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1166 ATGGCGACGACACGATCCGCGCCGCTCCTCAAGCAACTCCTCACCCGGCTCAACCCGACCCGCTCGGTCACCTACATGCCCCGACCCGGAGACGGCGCCCCGCGCGCCGTGACTCTCATCCCCGGCGACGGGATCGGGCCTATGGTGACCGGCGCGGTGGAGCAGGTGATGGAGGCGATGCACGCGCCGGTGTACTTCGAGAAGTACGAGGTGCACGGTGACATGAAAGCGGTGCCTCCAGAGGTGATCGAATCGATTAAGAAGAACAAGGTGTGTTTGAAGGGAGGGCTCGCCACTCCCATGGGTGGTGGCGTGAGTTCGCTGAACGTTCAGCTGAGGAAGGAGTTGGATCTCTACGCTTCTCTCGTTAACTGCTTCAACCTACCTGGTCTTCCCACGCGCCACGAAAATGTTGATATCGTCGTTATCAGGGAGAACACTGAGGGAGAGTACTCCGGCCTCGAACACGAGGTCGTTCCCGGCGTTGTTGAAAGCCTCAAGTTCTGTTCTGAGCGCGTTGCTAAATATGCTTTCGAGTATGCATACCTAAATAATAGAAAGAAGGTGACTGCTGTGCACAAAGCAAACATTATGAAACTTGCAGATGGTTTATTCTTGGAATCCTGCCGAGAGGTTGCTAGAAAGTATCCTGGAATCAAGTATAATGAAATTATCGTAGATAACTGTTGCATGCAGCTTGTTTCAAAGCCTGAACAGTTTGATGTCATGGTAACCCCCAATCTTTATGGAAATCTTGTTGCAAATACAGCAGCAGGTATTGCTGGAGGCACTGGAGTCATGCCGGGAGGTAATGTTGGGGCTGATCACGCTGTGTTTGAACAAGGTGCTTCAGCAGGAAATGTTGGTAATGAGAAAGTAGTGATTCAAAAGAAAGCCAACCCAGTTGCTCTCCTCCTTTCTTCGGCCATGATGCTTAGACATCTCCAGTTTCCTGCATTTGCTGACCGATTGGAAACTGCTGTGAAACGAGTCATTCTGGAGGGAAAATACCGGACAAAGGACCTTGGAGGGACAAGCACCACCGAAGAGGTTGTTGATGCAGTGTTAGATGCTTTAGATTGA 1083 0.5134 MATTRSAPLLKQLLTRLNPTRSVTYMPRPGDGAPRAVTLIPGDGIGPMVTGAVEQVMEAMHAPVYFEKYEVHGDMKAVPPEVIESIKKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKFCSERVAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVARKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNEKVVIQKKANPVALLLSSAMMLRHLQFPAFADRLETAVKRVILEGKYRTKDLGGTSTTEEVVDAVLDALD* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1166 360 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 33 358 IPR004434 GO:0006099
Apr7g1166 360 Pfam Isocitrate/isopropylmalate dehydrogenase 37 355 IPR024084 -
Apr7g1166 360 Gene3D Isopropylmalate Dehydrogenase 25 358 - -
Apr7g1166 360 SMART Iso_dh_2 36 355 IPR024084 -
Apr7g1166 360 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 36 359 - -
Apr7g1166 360 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 19 357 - -
Apr7g1166 360 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 19 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1166 Apr-Chr7 18561236 18565441 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1166 K00030 - gmx:100778831 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1166 7 18561236 18565441 Apr7g1166 7 18561236 18565441 ECH