Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1163 ATGAGACAAGACCTGGTTCAGTGCTCCACAAACACCACTCCATTGTCACCAATCAGTTTCCTAGAACGAGCAGCCACTGCCTATGGTGATAAGACCTCCATCATCTACAATGATCGTGTGAGATTTTCTTGGAGGGAAACCTATGAAAGATGCCTCAAGCTTGCTTCTGCTTTGCTAATGGTAGGGATTTTGCAGGGCGATATTGTTGCAGCTTTGGCACCAAATATTCCTGCACTATACGAGCTTCATTTTGGTGTTCCAATGGTAGGTGCTGTTCTTTCTGCTCTCAACACCAAATTGGATGTAACAACATTGGCGCTAATATTGGAACTATCAGAACCATGCAAAATCATATTTGTGGATTATCAGTTCATTGATTCTGTCATCAAAGCATCCGAAATGATCACCCAGAGAAAATGCAAGCCACCCCTCATTGTCCTAATACATGATTATGGCCAAGAACCAACATTCTTAATGAAGGGTATTTCATCATCATGTTCCTTAAACTACAAGGAATTTCTTGCAATGGGACAATTAGATTTTGAGGCTTTAATACCAAGCAATGAATGCAATCCTATATCAGTGAATTACACATCAGGCTCCACAGGGATTCCTAAAGGTGCTGTTTATAGTCATAGAGGTGCCTATCTTAATTCACTTGCAACAATTGCTCGTTTCAACATGAAACAAATGCCAGTGTTCCTATGGACAGTTGACATGTTTCGTTGTAATGGGTGGTGCTTCACTTGGGCAATGTCTGCACTTGGTGGCGCCAATATCTGCCTAAGAAATGTCTCAGCAAAAGGAATATATGATGCAATTCACCTTCATAGGGTGACTCATTTTTGTGGTGCACCTACCCTTTTGGAAATGATTGCATATGCATCACCTAGTGATCAAAGGTCTCTGCCTCACAGGGTGAATGTCACAGTTGCTGGTGTATTACCACCATTTCATGTTCTCAACAAGGTAGCAGAACTTGGATTTGATGTGAACATTGGATATGGTATGACAGAGGCTCTTGGTCCTGTTATTCTAAGACCATGGAAACCCAATTTAGATGATGATTACACAAAGTTGAATTATGGTGAACAAGGGGTTCTAGACTTCATGCAAGATGTTGATGTGAAAGATCCAGAAACTATGAAGAGTACTCCTCATGATGGGAAAACAATAGGTGAAATTATGTTCAAAGGGCATAGTTTAATGACGGGGTACCTTAAGAATCCACAAGCAACTGAAAAAGCTTTTAGGGGTGGGTGGTATAGAACTGGGGACCTTGCTATTAGGCAACATAATGGTTCTATAACATTGAAAGATAGAGCAAAGGATATTATATATTCTGAAGGAGAGGCTGTGAGCACACTAGAGGTAGAAGCAGTGTTGTTGAATCATCCAAAGGTTTTGAAAGTGGCTGTTGTGGGTAGATATGATGATTGCTTGGTGGAATCACCATGTGCAATTGTCAAATTGAAAGATGGGTGTAATGCCACTGTTGAAGATATCATCAAGTTTTGTGAAGATCATTTGGCTACTCACATGGTTCCTAAGAGTGTGGTCTTCGGTGATTTGATTGTTAATTCAACTGGGAAGGTACAGAAATTTCGTATCAAGGAGAAGATCAGAAGTAATTAG 1635 0.4049 MRQDLVQCSTNTTPLSPISFLERAATAYGDKTSIIYNDRVRFSWRETYERCLKLASALLMVGILQGDIVAALAPNIPALYELHFGVPMVGAVLSALNTKLDVTTLALILELSEPCKIIFVDYQFIDSVIKASEMITQRKCKPPLIVLIHDYGQEPTFLMKGISSSCSLNYKEFLAMGQLDFEALIPSNECNPISVNYTSGSTGIPKGAVYSHRGAYLNSLATIARFNMKQMPVFLWTVDMFRCNGWCFTWAMSALGGANICLRNVSAKGIYDAIHLHRVTHFCGAPTLLEMIAYASPSDQRSLPHRVNVTVAGVLPPFHVLNKVAELGFDVNIGYGMTEALGPVILRPWKPNLDDDYTKLNYGEQGVLDFMQDVDVKDPETMKSTPHDGKTIGEIMFKGHSLMTGYLKNPQATEKAFRGGWYRTGDLAIRQHNGSITLKDRAKDIIYSEGEAVSTLEVEAVLLNHPKVLKVAVVGRYDDCLVESPCAIVKLKDGCNATVEDIIKFCEDHLATHMVPKSVVFGDLIVNSTGKVQKFRIKEKIRSN* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1163 544 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Apr7g1163 544 Pfam AMP-binding enzyme C-terminal domain 457 524 IPR025110 -
Apr7g1163 544 Gene3D - 443 543 IPR045851 -
Apr7g1163 544 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 24 542 - -
Apr7g1163 544 CDD ttLC_FACS_AEE21_like 13 539 - -
Apr7g1163 544 Gene3D - 2 442 IPR042099 -
Apr7g1163 544 PANTHER ACYL-ACTIVATING ENZYME 24 542 - -
Apr7g1163 544 SUPERFAMILY Acetyl-CoA synthetase-like 10 542 - -
Apr7g1163 544 Pfam AMP-binding enzyme 21 446 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1163 Apr-Chr7 18512838 18520440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1163 79 543 Miscellaneous Gene Families AT1G20560 47.679 4.03e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1163 - - gmx:100819291 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1163 7 18512838 18520440 Apr7g1163 7 18512838 18520440 ECH