Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1119 ATGATGCTAGACGGCACCGAAGACGAAGAGAAGTTTCTCGCCGCCGGAATCGCCGGTCTTCAGCAAAATTCCTTCTACATGCACCGTGCATTGGACTCCAACAATCTCAGGGATGCTTTGAAGTATTCGGCTCAGATGCTTTCTGAGCTCAGGACTTCCAAGCTTTCTCCTCACAAGTACTATGAACTCTATATGCGCGCTTTTGATCAGTTAAGGACACTGGAGATGTTCTTCGAGGAAGAGACTCGTCGCGGTTGCTCTATTATTGATCTTTATGAACTCGTCCAGCACGCTGGCAACATTTTGCCCCGATTGTATCTCCTCTGTACAGTAGGATCTGTATACATCAAATCCAAAGAAGCTCCTGCTAAGGATGTTCTTAAGGATCTTGTGGAGATGTGTCGTGGCATTCAGCACCCTGTTCGTGGACTCTTTCTCAGAAGTTACCTTTCTCAAGTTAGTAGGGATAAATTGCCAGATATTGGTTCAGAGTATGAAGGGGATGCAGATACCGTAGCAGATGCTGTGGAGTTTGTACTCCAAAATTTCACTGAAATGAACAAACTTTGGGTGCGGATGCAACATCAGGGGCCTGCCCGGGAGAAGGAGAAACGGGAAAAGGAAAGGAGCGAGCTGCGCGATCTTGTTGGGAAGAATCTTCATGTCCTCAGTCAGATAGAGGGTGTTGACCTTGATATGTACAAAGATGTTGTGCTTCCCAGAGTCCTGGAACAGGTGGTAAATTGCAAAGATGAATTGGCCCAATTCTACTTGATGGATTGCATAATTCAAGTCTTCCCTGACGAGTATCACTTGCAAACGCTTGATGTGTTGTTGGGTGCTTACCCTCAGCTTCAGGCGTCTGTTGACATCAAGACAGTACTGTCCCAGTTAATGGAAAGGCTTTCAAATTATGCTGCTTCAAGTGCAGAGGTGTTGCCAGAGTTTTTGCAAGTGGAAGCATTTTCAAAATTAAGCAATGCCATTGGCAAGGTGATAGAGGCTCAGCCTGACATGCCCACTGTTGGAGTTGTAACTTTATATTCATCTCTTCTCACCTTCACTCTTCATGTCCATCCTGATCGACTTGATTATGCGGATCAAGTCTTGGGAGCATGCGTGAAAAAACTCTCTGGCAAAGGCAAAATTGAGGAAAACAAGGCAACTAAGCAGATTGTTGCTCTGTTAAGTGCTCCCCTTGAGAAATATAATGATATTATGACTGCCTTGAAGCTTTCAAATTATCCTCGTGTAATGGAATATCTTGATATTCCTACTACTAAGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAACGGAACACGAATTTCTACTTCAGAAAAGGTTGAAGCATTGTTTGAATTGATAAAGGGACTTATCAAGGATTCTGATGGGAGTCCTAATGATGAGCTGGATGAAGATGATTTCAAAGAGGAGCAGAATTCTGTTGCCCGTCTAATCCAGATGCTTTATAATGATGATCCGGAAGAAATGTTTAAGATCATAGATACTGTGAGGAAGCACATACTTACCGGAGGACCAAAACGTCTGCCTTTCACTGTTCCACCTCTTGTTTTTTCTTGTTTGAAGTTGGTTAGACAGTTGCAAGGTCAAGACGAAAATCCTTTTGGAGATGATGCATCAACAACACCAAAGAAAATTTTTCAGCTTTTAAATCAGACCATTGAGACTTTGTCAGGTGTCCTAGCACCAGAATTAGCATTGCAGTTGTACTTGCAATGTGCTGAGGCTGCAAATGATTGTGATTTGGAACCAGTTGCATATGAATTTTTCACCCAAGCTTATATTCTATATGAAGAAGAAATTTCTGATTCCAGAGCACAGGTCACAGCTATCCATTTAATAATAGGAACTCTTCAAAGGATGCATGTCTTTGGTATTGAGAACAGGGATACTTTAACTCACAAGGCCACCGGGTATTCAGGAAAGCTTCTAAAGAAGCCAGATAAATGCAGAGCTGTGTATGCATGCTCACATCTGTTTTGGGTTGATGATCATGATACCATGAAAGATGGAGAGAGGGTCCTATTATGTCTCAAGCGGGCTCTAAGAATTGCAGATGCTGCACAAGAAATGGCAAATGCAGCACGAGGTAGCACTGGATCAGTAATGCTCTTCATTGAGATATTGAACAAGTATCTTTACTTCTTTGAGAAAGGAAACCCACAAGTCACCGTAGCTGCTATCCAGGGATTAATTGAGTTAATTATGAATGAAATGCAAAGTGACTCCACAACTCCAGATCCAGCTGCCGATGCTTTCTTCGCCAGTACTATGCGATATATACAGTTCCAAAAACAAAAAGGTGGCACAGTAGGTGAGAAGTATGAGCTCATCAAGGTTTCACATGCTGGATGA 2385 0.4252 MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRTLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVADAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQASVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTVGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKKLSGKGKIEENKATKQIVALLSAPLEKYNDIMTALKLSNYPRVMEYLDIPTTKVMATVIIQSIMKNGTRISTSEKVEALFELIKGLIKDSDGSPNDELDEDDFKEEQNSVARLIQMLYNDDPEEMFKIIDTVRKHILTGGPKRLPFTVPPLVFSCLKLVRQLQGQDENPFGDDASTTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGIENRDTLTHKATGYSGKLLKKPDKCRAVYACSHLFWVDDHDTMKDGERVLLCLKRALRIADAAQEMANAARGSTGSVMLFIEILNKYLYFFEKGNPQVTVAAIQGLIELIMNEMQSDSTTPDPAADAFFASTMRYIQFQKQKGGTVGEKYELIKVSHAG* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1119 794 Pfam Vacuolar protein sorting-associated protein 35 13 747 IPR005378 GO:0015031|GO:0030906|GO:0042147
Apr7g1119 794 PIRSF Retromer_Vps35 2 793 IPR005378 GO:0015031|GO:0030906|GO:0042147
Apr7g1119 794 Gene3D - 465 775 IPR042491 -
Apr7g1119 794 PANTHER VACUOLAR SORTING PROTEIN 35 2 790 IPR005378 GO:0015031|GO:0030906|GO:0042147
Apr7g1119 794 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 790 - -
Apr7g1119 794 SUPERFAMILY ARM repeat 223 752 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1119 Apr-Chr7 18152470 18163578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1119 K18468 - gmx:100811902 1503.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1119 7 18152470 18163578 Apr7g1119 7 18152470 18163578 ECH