Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1118 ATGGCTTCCACGTCCACCCATTTCTCTCTTTTCCTTTCCACCAAACAACCATCTCCAATCCCCAAACCCTCTTTCTTCTCCCATCCCAAAAACAAACACTTCAACTGCAACCCCAAGTGGGCTTGGGCCTCTCTTTCCGCCGCATCCAAGTCAAGGATACGCGCCGCTTCCTCTCAGGTCATGGATCCCTTCGTACCCAAAACCCAACCCACCATCGTCGAAGTCGATTTGGGCAATCGGAGCTACCCCATTTATATCGGATCCGGGTTACTTCACCAACCACAGTTACTTCAGAGGCATGTGCATGGAAAGAGGGTCCTTGTTGTAACTAATAAAACGGTTGCACCACTGTATTTAGATAAAGTTGTTGAGGCTTTAACAAGTGGAAACCCTAATGTTTCTGTTGAGACTGTAATTTTACCGGACGGTGAACAGTACAAGGACATGGATAATCTTATGAAAGTCTTTGATAAGGCCATTGAATCGCGACTTGATCGGCGGTGTACGTTTGTAGCTCTTGGAGGCGGTGTGATTGGCGATATGTGTGGCTTTGCTGCCTCCGCGTTCCTGCGTGGTGTTGACTTTATCCAGATTCCAACCACTGTTATGGCACAGGTTGATTCTTCAGTTGGTGGCAAAACCGGGATAAACCATAGCCTTGGAAAGAACTTGATCGGTGCTTTTTACCAACCTCAGTGTGTGCTTATAGACACGGACACTTTAAGTACATTACCGGATAGGGAACTGGCATCAGGGTTTGCAGAGGTTATAAAGTATGGGCTCATTAGGGATGCAAAGTTTTTTGAGTGGCAAGAGAAAAATATGCAGGCATTACTGGCAAGAGATCCTAGTGCACTAGCATATGCTATAAAGCGATCTTGTGAAAACAAGGCTGAGGTTGTGTCTTTAGATGAGAAGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATGCAATAGAAACTGGGTCTGGCTATGGGCAGTGGCTTCATGGAGAAGCTGTTGCAGCTGGCATGGTAATGGCAGTTGACATGTCATATCGCCTAGGTTGGATTGATGATTCTATTGTGAAGCGAGTTCAAGACATTTTAAAACAGGCTAAGTTACCTACAGCCCCCCCTGAGATCATGACAGTGGACATGTTTAAATCTATCATGGCGGTTGATAAGAAGGTGGCAGATGGATTACTAAGGCTTATCCTTCTAAAGGGTCCCCTAGGCAATTGCGTTTTCACAGGGGATTATGACAGAAAGACCCTAGATGATACGCTGCGTGCATTCTGTAAATCCTGA 1305 0.459 MASTSTHFSLFLSTKQPSPIPKPSFFSHPKNKHFNCNPKWAWASLSAASKSRIRAASSQVMDPFVPKTQPTIVEVDLGNRSYPIYIGSGLLHQPQLLQRHVHGKRVLVVTNKTVAPLYLDKVVEALTSGNPNVSVETVILPDGEQYKDMDNLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAASAFLRGVDFIQIPTTVMAQVDSSVGGKTGINHSLGKNLIGAFYQPQCVLIDTDTLSTLPDRELASGFAEVIKYGLIRDAKFFEWQEKNMQALLARDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGSGYGQWLHGEAVAAGMVMAVDMSYRLGWIDDSIVKRVQDILKQAKLPTAPPEIMTVDMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKTLDDTLRAFCKS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1118 434 Pfam 3-dehydroquinate synthase 138 396 IPR030960 -
Apr7g1118 434 SUPERFAMILY Dehydroquinate synthase-like 74 428 - -
Apr7g1118 434 Gene3D - 62 243 - -
Apr7g1118 434 PANTHER 3-DEHYDROQUINATE SYNTHASE 70 430 - -
Apr7g1118 434 Gene3D - 244 434 - -
Apr7g1118 434 CDD DHQS 81 428 - -
Apr7g1118 434 Hamap 3-dehydroquinate synthase [aroB]. 70 432 IPR016037 GO:0003856|GO:0005737|GO:0009073
Apr7g1118 434 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 70 430 - -
Apr7g1118 434 TIGRFAM aroB: 3-dehydroquinate synthase 82 423 IPR016037 GO:0003856|GO:0005737|GO:0009073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1118 K01735 - gmx:100806628 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1118 7 18142359 18146280 Apr7g1118 7 18142359 18146280 ECH