Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1090 ATGGCCATAAAAAAATCCAATATACTACCACAAGCTGTTGTTCTTAAGCAAATTCTCAAAAGATGCTCAAGTTTTGGAAAGAAGCAGAACTACAATGAAGAGGGTCTTCCTGTTGATGTGCCAAAAGGCCATTTTGTGGTCTATGTTGGGGAAAACAGGACAAGATACATTATCCCAATTGCATGGCTAGCTCATCCTCAGTTTCAAAGTTTGCTCCAAAGAGCTGAAGAGGAGTTTGGCTTCAATCATGATATGGGACTTACCATCCCCTGTGATGAAGTTGTTTTTGAGTCCCTAACCTCAATGATGAGATAA 315 0.4 MAIKKSNILPQAVVLKQILKRCSSFGKKQNYNEEGLPVDVPKGHFVVYVGENRTRYIIPIAWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFESLTSMMR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1090 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Apr7g1090 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Apr7g1090 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1090 Apr-Chr7 17877635 17877949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1090 5 103 Calmodulin-binding Proteins AT4G34750 42.000 7.15e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1090 K14488 - gmx:100798840 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0336 3 6732842 6733300 Apr7g1090 7 17877635 17877949 ECH
Apr5g1648 5 20105836 20106150 Apr7g1090 7 17877635 17877949 ECH
Apr7g1090 7 17877635 17877949 Apr7g1090 7 17877635 17877949 ECH
Apr5g1816 5 21429250 21429673 Apr7g1090 7 17877635 17877949 ECH