Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0336 ATGGCCATAAGGAAATCCAATAAGCTACCCCAAACAGATGTTATCAAGCAAATTCTCAAAAAGTGCTCAAGTTTTGGTAAAAAACAAGGCTACAACGAAGAGGGTCTTCCTGAAGATGTACCAAAAGGCCACTTTGCAGTCTATGTTGGTGAAAACAGGACAAGATATATTGTCCCAATTTCATGGTTGGCTCACCCACAGTTTCAAAGTTTGCTCCAAAGAGCTGAAGAAGAGTTTGGCTTTAATCATGATATGGGCCTTACCATCCCATGTGATGAAGTTGTTTTTGAGTTCCTTACCTCAATGATCAGATAA 315 0.3968 MAIRKSNKLPQTDVIKQILKKCSSFGKKQGYNEEGLPEDVPKGHFAVYVGENRTRYIVPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSMIR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0336 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Apr3g0336 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Apr3g0336 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0336 Apr-Chr3 6732842 6733300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0336 5 103 Calmodulin-binding Proteins AT4G34750 43.434 2.74e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0336 K14488 - gmx:100500218 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0336 3 6732842 6733300 Apr7g1090 7 17877635 17877949 ECH
Apr5g1648 5 20105836 20106150 Apr3g0336 3 6732842 6733300 ECH
Apr3g0336 3 6732842 6733300 Apr3g0336 3 6732842 6733300 ECH
Apr5g1816 5 21429250 21429673 Apr3g0336 3 6732842 6733300 ECH