Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1079 ATGAGACAGGAATGGGTGTTGACGATGATGTCGTGTTTGTTGGTGTTTCCGTTACTGTTGTTTCCGACGGTGGCTGGGGCACCTCACGCGCTGCCAAGTCGTTTGGCTGTAACTGAGAGCGCCAAGTATCTAACCGATCAAGAGCTGTGGTTCTCACAGACGCTCGACCACTATTCTCCCTACGATCACCGCAAATTCCAGCAACGTTACTATGAGTTCCTTGACAATTTCCGGATTCCAGATGGACCAATTTTTTTGGTAATCTGTGGTGAATATTCATGCAATGGGATAAAAAATGACTATATCAGTGTTCTGGCAAAGAAATTTGGAGCAGCTGTGGTTTCTCTTGAGCATCGCTATTATGGAAAGAGTTCTCCATTTAAATCTCTGACAACAAATAATTTGAGATATCTTTCATCCAAGCAGGCGCTCTTTGATTTGGCTGTTTTCCGCCAGAAATATCAGGATTCCTTAAATACAAAGCTTAATAGAACGAACAGTGAAAATCCCTGGTTTGCTTTCGGTGTCTCATATCCTGGGGCTCTCAGTGCGTGGTTCCGTCTCAAGTTTCCTCATTTAACATGTGGAAGTCTTGCAAGTTCTGCAGTTGTTCTTGCTGTTTACAACTTCACAGACTTTGATAAGCAGATTGGTGAGTCAGCCGGTGCTGAATGTAAAGCTGCATTACAAGAAACCACTCAACTTATTGAACAAAAACTGGAAATTAACAGAAAGGCACTGAAGGCTTCTTTTAATGCAGCTGATCTTGAAATTGATGGTGACTTCTTGTACTTTTTGGCTGATGCTGCTGTTACAGCTTTTCAATATGGAAATCCAGATATATTATGCAAGCCTCTTGTTGAAGCAAAGAAGGCTGGAGAGGATTTGGTGGGTGCTTATGCCAAGTATGTCAAAGAGTATTACCTTGGAACCTATGGTGTTAATGTACAAACATATAACCAAAAGTACTTGAAAAACACTGAAGTCAGTGAAAACAGTTCTGATAGACTATGGTGGTTTCAAGTTTGCACTGAAGTTGCATACTTTCAGGTGGCTCCCTCAAATGATAGTGTGCGCTCATCAAAAGTTGACACAAGATACCATTTGGACCTTTGCAAAAACGTTTTTGGAGAAGGTATCTTTCCTGACGTGGATGCAACTAATATATATTATGGAGGCACAAAAATTGCTGGTTCCAAAATAATATTTACAAATGGCTCACAAGATCCTTGGCGTCATGCATCAAAACAAATTTCATCCCCTGATATGCCTTCATACACTATCACATGTTACAATTGTGGCCATGGAACTGACATGCGAGGATGTCCTCAAGATCCCTTTAACCTTGAAGTTCACAAAGTTAGGCAAAAGATCATAGAGAATATGAACTTGTGGCTATCTCAGTGCCATGACCCCGGCAGGAATTGTATATAA 1434 0.4114 MRQEWVLTMMSCLLVFPLLLFPTVAGAPHALPSRLAVTESAKYLTDQELWFSQTLDHYSPYDHRKFQQRYYEFLDNFRIPDGPIFLVICGEYSCNGIKNDYISVLAKKFGAAVVSLEHRYYGKSSPFKSLTTNNLRYLSSKQALFDLAVFRQKYQDSLNTKLNRTNSENPWFAFGVSYPGALSAWFRLKFPHLTCGSLASSAVVLAVYNFTDFDKQIGESAGAECKAALQETTQLIEQKLEINRKALKASFNAADLEIDGDFLYFLADAAVTAFQYGNPDILCKPLVEAKKAGEDLVGAYAKYVKEYYLGTYGVNVQTYNQKYLKNTEVSENSSDRLWWFQVCTEVAYFQVAPSNDSVRSSKVDTRYHLDLCKNVFGEGIFPDVDATNIYYGGTKIAGSKIIFTNGSQDPWRHASKQISSPDMPSYTITCYNCGHGTDMRGCPQDPFNLEVHKVRQKIIENMNLWLSQCHDPGRNCI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1079 477 SUPERFAMILY alpha/beta-Hydrolases 54 212 IPR029058 -
Apr7g1079 477 Pfam Serine carboxypeptidase S28 53 453 IPR008758 GO:0006508|GO:0008236
Apr7g1079 477 PANTHER SERINE PROTEASE EDA2-RELATED 19 472 - -
Apr7g1079 477 Gene3D alpha/beta hydrolase 50 465 IPR029058 -
Apr7g1079 477 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 19 472 - -
Apr7g1079 477 Gene3D Serine carboxypeptidase S28, SKS domain 212 362 IPR042269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1079 Apr-Chr7 17757874 17764241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1079 - - tcc:18610807 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1079 7 17757874 17764241 Apr7g1079 7 17757874 17764241 ECH