Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1072 ATGGGGTCTCTGTGCTTCCCTCTATTTTTCATTATCGCAGCTTCGGGCTTGTTATTGGGAGCAGAATCAAAGACATACTGGGGAGATGCAGAGGTTCTGAAGCAGCTGAACCAAGGTCTGGACCCAGGTTCGGTAAACGCAGGCTCTTGCGTCAGTTCCTGGGACTTCACTTTTGACCCGTGCGACAACCTCTTAGGCGACAAATTCACGTGCGGCTTCAGATGCGACGTCGTCGTTTCGGGGCTGAGCCGAGTCACGGAACTCGCCCTCGACCAAGCCGGTTACTCTGGCTCCCTCTCCTTCACTTGGAACCTTCCTTATCTACAAACCCTCGATGTCTCCAACAATTACTTCTATGGCCTCATTCCGGAGTCCTTATCGAACTTGACTCGTCTACGCCGACTCAGTTTCTCATCCAACTCGTTCTCCGGTGAAATACCCTCTTCACTTGGCCTCCTCTCCAACCTTGAAGAACTCTACCTCGACAACAATAACCTACGAGGAACAATCCCAGAAAGTTTCAACAACCTCGTCAACCTTAAAAGGCTTGAACTTCAATCTAACAAGCTCAACGGCCACCTTCCCTACTTGGGTTCCCTCGGAAGCCTTTACTACCTCGCCCTCAGCGACAACTCCGTCGCTGGAGAATTGCCGGAGTCACTCCCCGTTTCCTTGGTTCAGATTTCAATTAGGAACAACAACTTAAGCGGAGGGTTAACCTCTGAAAACTTGAAGAATTTGATGAACTTGCAGGTAGTGGACTTGAGTTCCAACCAAATGAGTGGCTCTGTTCCTTCCGTTCTGTTCGAGCTTCCATCGCTGCAACAGTTAACACTGTCCTTCAACGAATTCTCCTCCGTGGAAGCGCCTTTTTATGGAATGGGATCACAAAGCGGGCTCATAGCGGTTGATCTGAGCAACAACAGGCTAGGGGGTATTTTGCCGTCGTTCATGGCCCTGATGCCAAAGCTTTCGTCTTTGTCCTTGGAGAAGAACGAGTTAACGGGTCTGATACCGACCCAATTCGCAGTGAAAACAGTTTTCCCAGAAAATGGGGTGTCTCCGTTCGATAGGCTTCTATTGGGGGGAAACTACTTGTTGGGAGGGATTCCACGGCCTTTATTAGCGCTTAAACCGGATTCTGCTAACGTGAGCCTTGTGGATAACTGCTTGTATAGGTGCCCTCATAGCTTCTTTTTCTGCCAGGGTGGACAACAGAAGTCGTTTGCCCAATGTAAGAGATTTAGCCGTCATCGCTTAACATGA 1266 0.4953 MGSLCFPLFFIIAASGLLLGAESKTYWGDAEVLKQLNQGLDPGSVNAGSCVSSWDFTFDPCDNLLGDKFTCGFRCDVVVSGLSRVTELALDQAGYSGSLSFTWNLPYLQTLDVSNNYFYGLIPESLSNLTRLRRLSFSSNSFSGEIPSSLGLLSNLEELYLDNNNLRGTIPESFNNLVNLKRLELQSNKLNGHLPYLGSLGSLYYLALSDNSVAGELPESLPVSLVQISIRNNNLSGGLTSENLKNLMNLQVVDLSSNQMSGSVPSVLFELPSLQQLTLSFNEFSSVEAPFYGMGSQSGLIAVDLSNNRLGGILPSFMALMPKLSSLSLEKNELTGLIPTQFAVKTVFPENGVSPFDRLLLGGNYLLGGIPRPLLALKPDSANVSLVDNCLYRCPHSFFFCQGGQQKSFAQCKRFSRHRLT* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1072 421 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 417 - -
Apr7g1072 421 SUPERFAMILY L domain-like 71 405 - -
Apr7g1072 421 Pfam Leucine rich repeat 106 166 IPR001611 GO:0005515
Apr7g1072 421 Pfam Leucine rich repeat 225 283 IPR001611 GO:0005515
Apr7g1072 421 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 417 - -
Apr7g1072 421 Gene3D Ribonuclease Inhibitor 28 194 IPR032675 -
Apr7g1072 421 Gene3D Ribonuclease Inhibitor 195 413 IPR032675 -
Apr7g1072 421 SMART LRR_typ_2 105 128 IPR003591 -
Apr7g1072 421 SMART LRR_typ_2 177 200 IPR003591 -
Apr7g1072 421 SMART LRR_typ_2 321 344 IPR003591 -
Apr7g1072 421 SMART LRR_typ_2 271 293 IPR003591 -
Apr7g1072 421 SMART LRR_typ_2 153 176 IPR003591 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1072 77 413 Receptor kinase-like Gene Family AT1G17750 27.671 8.88e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1072 - - gmx:100811366 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1072 7 17657083 17659420 Apr7g1072 7 17657083 17659420 ECH